Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq3808 127 2e-24 >seq3808 Length=15542 Score = 127 bits (140), Expect = 2e-24 Identities = 222/323 (69%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 ||| | || ||||| |||| || ||| || || ||||| || || |||||||| || Sbjct 5755 GAACTCTCCTGTCATCTGTACCAGCGAAGTGCAGACATGGGGCTCGGGGTTCCTTTTAAC 5814 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGT 20571 || || |||||||||||| || || |||||||| ||||| || | || || | ||| Sbjct 5815 ATCGCCTCTTATGCGCTGCTCACCTACATGATTGCCCATGTGACCGGATTGAAGCCTGGT 5874 Query 20572 GACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAA 20631 ||||| ||||||||||| ||||| | ||| | || ||||||||| | ||||| || || Sbjct 5875 GACTTTGTCCACACCATGGGAGATTCTCATGTGTATCTTAATCATGTGGAACCATTGCAA 5934 Query 20632 TTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAA 20691 || ||| || || || | ||| || | ||| ||||| || || | | Sbjct 5935 CAGCAACTAAAGCGGCAGCCTCGTCCATTTCCTAAGCTTAACATTAAGCGGCAGGTCACA 5994 Query 20692 GATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCA 20751 ||||| | || ||| ||| ||||||| | | || || ||||| ||| | Sbjct 5995 AATATTGAAGACTTTCGTTATGAAGATTTTGAAATCGTTGGATACAATCCTCATGAAAAG 6054 Query 20752 ATTCCAATGGAAATGTCTGTTTA 20774 |||| |||||| ||| ||||||| Sbjct 6055 ATTCAAATGGAGATGGCTGTTTA 6077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398959696639225