Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq61 500 8e-137
seq2872 288 9e-73
seq4710 95.1 1e-14
seq4983 87.8 2e-12
>seq61
Length=55249
Score = 500 bits (554), Expect = 8e-137
Identities = 1246/1881 (66%), Gaps = 59/1881 (3%)
Strand=Plus/Minus
Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165
|||| ||||| || || || || || || || || || ||||| ||||||||||| ||
Sbjct 28008 TTGTTGACTGTGAATTGAATAGCATTGGCAGCTGGCTTTGTGCGCAGATAATACATTCCT 27949
Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225
||||| || || |||||||| | | ||||| || || || || || || || | ||
Sbjct 27948 GTCTTGAGGCCTGCCTTCCACGAGAAGAAATGAATGGATGTTAACTTGCCGTAGTTGGGT 27889
Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285
| | | || | ||||| || |||||||| || ||||| || || ||||| || |||
Sbjct 27888 TCGGCAACGTGAATGTTGAATGATTGACTCTGGTCAATAAAAGCACCGCGATCAGCTGCC 27829
Query 22286 ATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCT 22345
|| || || || || ||| |||||||| ||||| ||||| || | || | ||
Sbjct 27828 ATCTTGATGGTTGACTTCACCGAGATTTCCCAGACGGTTTTGTAAAGATCCCGTACTTCC 27769
Query 22346 AACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATC 22405
|| || |||||||| | || | ||| || | || ||||| ||| || ||
Sbjct 27768 TGAGGAATGGATTCGATGTTTTGTATGGAGCCACGACTGGCAATGATTTGATTCTTCATG 27709
Query 22406 GTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGA 22465
||| | ||| ||| | | |||| ||||| | || |||| | || ||||| |
Sbjct 27708 TCATCATCCCATAAATCTAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATTG 27649
Query 22466 AACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525
||||| |||||||| ||||| | ||||||||| || || |||| || || || |||
Sbjct 27648 AACTCTCCGGACAAAACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTCA 27589
Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585
|| || |||| ||||| || || || || || ||||| || || | || |||||||||
Sbjct 27588 TTATTACCCATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCTACAAGCAGCGAGTTT 27529
Query 22586 CTCAAGCCGTG--CTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACG 22643
|| | ||| || |||||| || | | | ||||| | ||| ||||| || | |
Sbjct 27528 CTAACGCCATGCTCTTTGATTTTCAATTTTAGAGCA--GTCCAATCCCAAAGGCTTGTGG 27471
Query 22644 GCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGT 22703
| ||| ||||||||||||||||| |||| | || ||| |||| | || |||
Sbjct 27470 GTGTC---TTGTCCCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCAGCGT 27414
Query 22704 ACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAAT 22763
| ||||| || ||||| | | || || || || || ||||| | || || || |
Sbjct 27413 AGGTTTCATAGGGACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCATAGT 27354
Query 22764 ATATAGTCTCGAAGATTTTC---TTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCA 22820
| || || |||||||| | | ||| |||| |||| | | || || || || |
Sbjct 27353 AGATGGTTTCGAAGATCTGCTGATTGAGCAAT---ACGGCTTTGTCACTCTCATAGGGAA 27297
Query 22821 TACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTT 22880
|||||||| | || ||||| || | ||||||||||| || || || || || | |
Sbjct 27296 AACGCATCAGAATTAAGGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATGTC 27237
Query 22881 TCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCA 22940
| | ||| || ||||||||||||| ||||| |||| ||| || || ||||||
Sbjct 27236 TTAAATTGGATTTCTTTGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTTCA 27177
Query 22941 AGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT- 22999
| |||||||| ||| |||| || | | || ||| || | |
Sbjct 27176 AATTTCTGGTGACAGTTTTAGTAACTTCCTTCAGTTTCTTGAAATCG--AATGTTTTCTC 27119
Query 23000 TGTA-CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTT 23058
|| | |||||| | || | ||| ||||| || | |||||| ||||| | ||| ||
Sbjct 27118 TGAAGTCACAAACATATTCAAGGCTATCGATGCCAAATTGCAGACGGCAATCTCATCGGG 27059
Query 23059 GGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCT 23118
| || || || |||||||| || || || ||||| || || || ||||| | |||
Sbjct 27058 TGCCGAATATTCAACAATTTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCAACATTCTG 26999
Query 23119 CTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGAC 23178
||| ||||| || | ||||| || |||||| ||||||||||||| ||||| ||||| ||
Sbjct 26998 CTGATTGCTCTTCCTGTTGCAAGAGTCCTTGAAGAGCATGTACGGAGTGCCAGTCTCAAC 26939
Query 23179 CTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA---ACACG--TCGCACGTAC 23233
|| || || | || || ||| | ||| || || | | ||||| | || || |
Sbjct 26938 TTGAGATTCAACAATGGCATACCAAAGAGTTTGTGCTTTAATCACACGATTTGCGCGACC 26879
Query 23234 CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCC 23293
|| || |||||||||| |||| | ||||| || | || || ||| ||
Sbjct 26878 CTCGCT-----CTCGTACTTTGTATACAGCTTCTCAAAGTCATCCCCCCAAACGTCTTCC 26824
Query 23294 AGGCCGGGCGATTGCATCGGACACATGAG-----ACTCCACATTGAGTCATTTTCAACGC 23348
| |||||| | | ||||||| || | ||| ||||| | | || || |
Sbjct 26823 AAGCCGGGACACTTGTGAGGACACAACAGCGACCAATCCTCATTG-GCC----TCCACAC 26769
Query 23349 GTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCT 23408
| ||||||| ||||| |||||||| | |||||||| || || || || | ||| |
Sbjct 26768 GCTTCATAAACAGATCGGGTATCCACAAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTT 26709
Query 23409 CTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGA 23468
| ||||| ||||||||||| | ||||| || || || | || | |||||| || || |
Sbjct 26708 CCTTGCCCGTGTTCTTTTTGAGGTCCAAGAACTCAAAGATATCGGAATGCCAAGGTTCCA 26649
Query 23469 GGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGT 23528
|||||| |||||| ||||| |||| ||| ||| || |||||||| ||||| ||| |
Sbjct 26648 GGTAAATGGCAAAAGCGCCTGGTCGCTTGCCGCCACCTTGATCGACATAACGAGCCACAT 26589
Query 23529 TGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACA- 23587
| || ||||||| ||||| ||||| | ||| || || | ||| | ||||||
Sbjct 26588 TATTAAACACTCTGAGCATGGGCACCAAACCATTTGAAGTGCC----ATTAGTGCCACAG 26533
Query 23588 CTCGA---ACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTC 23644
|||| || || || |||| || || | || || ||||| || | |||||
Sbjct 26532 ATCGAGGTGCCCTTGGCACGAATACAATGCACATTGAGCCCAATGCCACCAGCGGATTTG 26473
Query 23645 GATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATG----CTGTCCTCTTT 23700
|| ||||| || || || | | | | | | ||||| |||||| | | | ||
Sbjct 26472 GAGATCATTGCACACTGCTCGACGGACTTGAAAATGCCTTCGATGGAATCGGAAACCATT 26413
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCG---CTTTGGGCGTAGCGGCCGAGAACAG 23757
| | | | ||||||||| ||||| || | |||| | ||| || | |||
Sbjct 26412 GTT----AAAAGGAAACACGATGACATCTGGGGACGATTGGTGGCAGCAGCAAATAAC-- 26359
Query 23758 TGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGC 23817
|| || || |||||||| || | | ||| | |||||||| || |||| ||||
Sbjct 26358 -GTTGGCGATGCATGCGTAAAATAGCGTTCCGATAACAGATTGTAAGTCTCGACAGCGGA 26300
Query 23818 ATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877
||| ||||| || || || || || || || || | ||||| ||||| || || | ||
Sbjct 26299 ATCGATGTCTTCGCCATGGATTCCAATCGCCACTCTCATCAGCATGTGCTGCGGACGTTC 26240
Query 23878 GACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937
| | | ||| || || || | || ||| ||||| | | || || || ||||||||
Sbjct 26239 GGCGATTTTGCCATTGATCTTTAGCAAATACGAACGCTCGAGGGTCTTGAAGCCAAAATA 26180
Query 23938 GTCATAGTTAAAGTCACGATC 23958
|| ||| ||| ||||||||
Sbjct 26179 GTTGTAGCCAAAATCACGATC 26159
>seq2872
Length=9359
Score = 288 bits (318), Expect = 9e-73
Identities = 571/839 (68%), Gaps = 26/839 (3%)
Strand=Plus/Minus
Query 57586 AAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCG 57645
|| |||| ||||||||||| ||||||||||||||||| || ||||| ||||| ||| |
Sbjct 3815 AACAGGCTGAAGCATCGTTCTGGACCGTCGAAGAAGTGGATCTGTCCAAGGACATGACTG 3756
Query 57646 ATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCG 57705
|||||| || | || |||| | |||| || || |||||||| || || |
Sbjct 3755 ATTGGGCCAAGCTTACGGATAATGAGCGTCATTTCATATCGCATGTGTTGGCCTTCTTTG 3696
Query 57706 CCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAG 57765
| || || ||||| ||||||||||| ||| |||||||| | ||| ||||||||||| |
Sbjct 3695 CTGCTTCTGATGGAATTGTTAACGAAAATCTGGTCGAACGTTTTAGCCAAGAAGTGCAGG 3636
Query 57766 TGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAA 57825
|||| ||||| | |||||||| || || || | ||||| || || |||||||| ||||
Sbjct 3635 TGACCGAGGCACGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATGTGCATTCCGAAA 3576
Query 57826 TGTATTCGCTACTCATCGATACGTACGTGAAGGA----CAACGACGAGAAACGTAGACTG 57881
|||| | ||||| || || || | | ||| || | ||||| || ||
Sbjct 3575 TGTACAGTGTGCTCATTGACACCTATATCAGGGATCCTCATCAGCGAGA---CTA-TCTC 3520
Query 57882 TTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGG 57941
||||| || || ||||| ||||| || | ||||||||| ||| | | |||
Sbjct 3519 TTCAATGCCATTGAAACGATGCCGGCTGTTAAGCGGAAGGCAGACTGGGCTCTTTCTTGG 3460
Query 57942 A----TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGA 57997
| | ||| | |||| || | || | | || || || || || || ||
Sbjct 3459 ATCTCTTCGAAG----GCTGCCAACTTTGGTGAACGTATTATTGCTTTTGCTGCTGTTGA 3404
Query 57998 AGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGAT 58057
||| || ||||| || |||||||| | || || ||| ||||||| || || || ||
Sbjct 3403 AGGCATCTTCTTCAGTGGGAGCTTTGCATCCATCTTCTGGCTGAAGAAGCGTGGACTTAT 3344
Query 58058 GCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTT 58117
||| || || || || |||||| ||||| || ||||| || ||||| ||| ||| ||
Sbjct 3343 GCCTGGACTTACATTCTCCAACGAATTGATCTCTCGCGATGAAGGTCTGCATTGTGACTT 3284
Query 58118 TGCGTGCCTAATGTACTCTCACATT--GTCAATAAACCGACGCGGGATCGCATCTTGGAC 58175
|||| || |||| || ||||| || | || | ||||| |||||| | ||
Sbjct 3283 TGCGGTGCTTATGT--TCCAACATTTGGTGCAGCGGCCTAGTCGGGAACGCATCATTGAA 3226
Query 58176 ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCC 58235
|| || || || || || | || || | ||||| ||||||| || || || || |
Sbjct 3225 ATCATAACGGATGCTGTGACTATTGAGCAGGAGTTCCTCACCGATGCGCTGCCCGTCAAC 3166
Query 58236 ATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTT 58295
|| | || |||||| || | ||||||| | || || |||||||| || || | ||
Sbjct 3165 TTGATTGGCATGAACTGTGCTCTGATGTCCGAATATATCGAGTTTGTCGCTGATCGCCTA 3106
Query 58296 TTGCTCGAACTGATTGGAGAGCGTCA---TTACAACACGAAAAATCCGTTTGATTTTATG 58352
||| | || | |||||| | | | ||||||||| || ||||| || || |||
Sbjct 3105 TTGGTTGA---GCTTGGAGTGGGCAAGATTTACAACACAAAGAATCCATTCTCGTTCATG 3049
Query 58353 AATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCA 58411
| ||||||| | || ||||| || ||||| ||||| || ||||| | ||||||||
Sbjct 3048 GAGATGATCTCTTTGGATGGCAAAACCAACTTCTTCGAGAAGAAAGTGGGTGAATATCA 2990
>seq4710
Length=78879
Score = 95.1 bits (104), Expect = 1e-14
Identities = 164/236 (69%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
||||| |||||||| ||||| ||||| ||||| || || || |||||| | || || ||
Sbjct 8835 TCAAA-ATGCAAATCTTCGTGAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTGGAG 8777
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| || || | | || | || || | || ||||||||||| | || ||
Sbjct 8776 CCATCTGATACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAAGGAATCCCCCCA 8717
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366
|| ||||||||||| || ||||||||||| ||| |||| || | ||| || ||
Sbjct 8716 GATCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCAGAC 8657
Query 31367 TATAACATTCAAAAAGAATCGACTCTT-CATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || || || ||||| ||| || |||| || | ||| | || ||||
Sbjct 8656 TACAACATCCAGAAGGAGTCGACCCTTGCACTTGGTGCTGCGTCTGCGTGGTGGTA 8601
>seq4983
Length=3163
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
||| ||||| || || |||||||| |||| ||||| || || ||| | || ||||| ||
Sbjct 874 AAATATGCAGATCTTTGTAAAGACATTGACTGGCAAGACCATTACCTTGGAGGTTGAGCC 815
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|| || | |||| | ||||| | || ||||||||| || | || || ||
Sbjct 814 CTCTGATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGA 755
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||||||||| | || ||||| || || ||||||||||| | || | ||| ||
Sbjct 754 TCAGCAGCGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGTACCCTCTCCGACTA 695
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || || || ||||| |||| ||
Sbjct 694 CAACATCCAGAAGGAGTCAACCCTTCACTTGGTGCT 659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445509499251600
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