Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq61 556 2e-153
seq2872 306 5e-78
>seq61
Length=55249
Score = 556 bits (616), Expect = 2e-153
Identities = 1279/1906 (67%), Gaps = 24/1906 (1%)
Strand=Plus/Minus
Query 78709 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 78768
|||| | |||||||||||| | | || || || || || || ||||| ||||||||
Sbjct 28008 TTGTTGACTGTGAATTGAATAGCATTGGCAGCTGGCTTTGTGCGCAGATAATACATTCCT 27949
Query 78769 GTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGA 78828
|| || || || |||| | ||||||| || |||| ||| || | ||
Sbjct 27948 GTCTTGAGGCCTGCCTTCCACGAGAAGAAATGAATGGATGTTAACTTGCCGTAGTTGGGT 27889
Query 78829 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 78888
|| || | || || || | |||||||| || || || || || || | || || |||
Sbjct 27888 TCGGCAACGTGAATGTTGAATGATTGACTCTGGTCAATAAAAGCACCGCGATCAGCTGCC 27829
Query 78889 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATC 78947
|| || ||| | | ||| | |||||||| | ||||| |||| || | || | ||
Sbjct 27828 ATCTTGATGGTTGACTTCACCGAGATTTCCCAGACGGTTTTGTAAAGATCCCGTACT-TC 27770
Query 78948 TTCTGGAAGG--TTTG-TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 79004
| |||| | || | | || || ||||| |||| | || || || |||||| ||
Sbjct 27769 CTGAGGAATGGATTCGATGTTTTGTATGGAGCCACGACTGGCAATGATTTGATTCTTCAT 27710
Query 79005 CTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 79064
|| |||| |||||| | | ||||||||| | | | | ||| |||| || || |
Sbjct 27709 GTCATCATCCCATAAATCTAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATT 27650
Query 79065 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTC 79124
|| ||||| ||||| || | || |||||||| || ||||| || || | || ||
Sbjct 27649 GAACTCTCCGGACAAAACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTC 27590
Query 79125 ATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA-T 79183
|||||| |||| || || ||||| |||||||| ||||| || || || || | | | |
Sbjct 27589 ATTATTACCCATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCTAC-AAGCAGCGAGT 27531
Query 79184 TTCTAAGACCGTATGATCT--GATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGA 79241
|||||| || ||| ||| |||||| |||||||| |||||||||||| |
Sbjct 27530 TTCTAACGCC--ATGCTCTTTGATTTTCAATTTTAGAGCAGTCCAATCCCAAAGGCTTGT 27473
Query 79242 CGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACT-AGCGTATGATCCTGTGT 79300
|| | ||| | ||| || || ||||| || || || | || | | || | ||
Sbjct 27472 GGGTGTCTTGTCCCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAA-CCAGCGT 27414
Query 79301 ATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAAT 79360
| |||||||| || || ||||||| || | |||||||| ||||| | || || || |
Sbjct 27413 AGGTTTCATAGGGACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCATAGT 27354
Query 79361 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAAT 79420
| ||||||||||| |||| || |||||| | |||| || ||| | ||| ||
Sbjct 27353 AGATGGTTTCGAAGATCTGCTGATTGAGCAATACGGCTTTGTCACTCTCATAGGGAAAAC 27294
Query 79421 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 79480
| ||||| || ||||| || || || ||||| ||||| || || || | ||||||
Sbjct 27293 GCATCAGAATTAAGGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATGTCTTA 27234
Query 79481 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 79540
||| || | | || || || | ||||| ||||| ||||| || ||||| || | ||
Sbjct 27233 AATTGGATTTCTTTGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTTCAAAT 27174
Query 79541 TCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA--- 79597
| ||| | ||| || ||||| ||||| ||||| ||| | |||
Sbjct 27173 TTCTGGTGACAGTTTTAGTAACTTCCTTCAGTTTCTTGAAATCGAATGTTTTCTCTGAAG 27114
Query 79598 TTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 79657
| |||||||| ||||| || | ||||||| ||| || ||||| | ||||| | |||
Sbjct 27113 TCACAAACATATTCAAGGCTATCGATGCCAAATTGCAGACGGCAATCTCATCGGGTGCCG 27054
Query 79658 CATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGAT 79717
||||| | ||||||||||||||||| || || || ||||| || | ||| || ||||
Sbjct 27053 AATATTCAACAATTTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGAT 26994
Query 79718 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAG 79777
| ||||| |||| || | ||||| | || ||| ||||||| ||||| |||| ||||
Sbjct 26993 TGCTCTTCCTGTTGCAAGAGTCCTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAG 26934
Query 79778 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GACTTGTATCTCTTTTCT 79836
|||| | ||| || | ||| | | | || || || | | || ||| | | |
Sbjct 26933 ATTCAACAATGGCATACCAAAGAGTTTGTGCTTTAATCACACGATTTGCGCGACCCT-CG 26875
Query 79837 CTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGA 79896
|| ||||| | |||||| | || || || || |||||||| || || || || |||
Sbjct 26874 CTCTCGTACTTTGTATACAGCTTCTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCGGGA 26815
Query 79897 CATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGA 79956
|| | || |||||||| || |||||| || ||| ||| || || |||||||| |||
Sbjct 26814 CACTTGTGAGGACACAACAGCGACCAATCCTCATTGGCCTCCACACGCTTCATAAACAGA 26755
Query 79957 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTC 80016
|| || ||||| | || || ||||| | | ||| ||||| || || || || |||
Sbjct 26754 TCGGGTATCCACAAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTGTTC 26695
Query 80017 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 80076
||||| || || | |||| | | ||||| |||||||| ||||||| ||| ||||| | |
Sbjct 26694 TTTTTGAGGTCCAAGAACTCAAAGATATCGGAATGCCAAGGTTCCAGGTAAATGGCAAAA 26635
Query 80077 ACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 80136
| || ||||| ||| || || ||||| | || | ||| |||||| | |||||
Sbjct 26634 GCGCCTGGTCGCTTGCCGCCACCTTGATCGACATAACGAGCCACATTATTAAACACTCTG 26575
Query 80137 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCA 80196
| ||| || | | |||||| || || ||||| || || |||| || | || |||||
Sbjct 26574 AGCATGGGCACCAAACCATTTGAAGTGCCATTAGTGCCACAGATCGAGGTGCCCTTGGCA 26515
Query 80197 CGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 80254
||||| | | | |||| || || || || || || ||| ||||| | ||| ||
Sbjct 26514 CGAATACAATGCACATTG--AGCCCAATGCCACCAGCGGATTTGGAGATCATTGCACACT 26457
Query 80255 GTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCA-TGTTAAGTAGAAAACAG 80313
| | | | | | ||||| || ||| ||| || || |||||| || |||||
Sbjct 26456 GCTCGACGGACTTGAAAATGCCTTCGATGGAATCGGAAACCATTGTTAA-AAGGAAACAC 26398
Query 80314 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 80373
||||| ||| ||||| | || | ||| |||||| || || || || ||||||||
Sbjct 26397 GATGACATCTGGGGACGATTGGTGGCAGCAGCAAATAACGTTGGCGATGCATGCGTAAAA 26338
Query 80374 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATT 80433
| ||| || | |||||||| ||||| | ||| || || || || ||| |||
Sbjct 26337 TAGCGTTCCGATAACAGATTGTAAGTCTCGACAGCGGAATCGATGTCTTCGCCATGGATT 26278
Query 80434 CCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTC 80493
|| | ||| || | ||| | ||||||||| || | ||| |||| ||| ||| || ||
Sbjct 26277 CCAATCGCCACTCTCATCAGCATGTGCTGCGGACGTTCGGCGATTTTGCCATTGATCTTT 26218
Query 80494 AACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCG 80553
| ||| || || || | || || || |||||||||||||| ||| || || ||
Sbjct 26217 AGCAAATACGAACGCTCGAGGGTCTTGAAGCCAAAATAGTTGTAGCCAAAATCACGATCA 26158
Query 80554 TAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 80599
|| || || | ||||| || ||| | ||| ||||| ||||
Sbjct 26157 TAGATGATCGCTGAGTTCAGGCGATCTGAGTTTTTCTTAACGACAT 26112
>seq2872
Length=9359
Score = 306 bits (338), Expect = 5e-78
Identities = 578/844 (68%), Gaps = 11/844 (1%)
Strand=Plus/Plus
Query 49658 TAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCA 49717
|||||||||| || ||||||||||| || ||||| || || ||||| || ||||
Sbjct 2976 TAACTCCCATGCGCTGATATTCACCCACTTTCTTCTCGAAGAAGTTGGTTTTGCCATCCA 3035
Query 49718 ATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCA 49777
| || || | |||||||| || ||||| | || ||||| || | ||| |
Sbjct 3036 AAGAGATCATCTCCATGAACGAGAATGGATTCTTTGTGTTGTAAATCTTGCCCACTCCAA 3095
Query 49778 ATTCAGAAATCAAT---CTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834
||| | |||| | ||| |||||||| || |||||| ||||| |||| |
Sbjct 3096 GCTCA---ACCAATAGGCGATCAGCGACAAACTCGATATATTCGGACATCAGAGCACAGT 3152
Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894
|||| || || | || || || || || | || || || || || ||||| | || |
Sbjct 3153 TCATGCCAATCAAGTTGACGGGCAGCGCATCGGTGAGGAACTCCTGCTCAATAGTCACAG 3212
Query 49895 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 49954
|||| ||||| || | | | ||| ||| || | |||| ||||||| ||||
Sbjct 3213 CATCCGTTATGATTTCAATGATGCGTTCCCGACTAGGCCGCTGCACCAAATGTTGGAACA 3272
Query 49955 TCAAACAT-GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAAC 50013
| || || || || || || |||||||| || || | | || | ||||||||| ||
Sbjct 3273 T-AAGCACCGCAAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAAT 3331
Query 50014 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAA 50073
|| ||||| ||||| || |||||||| || ||||| || ||||| ||||| ||||
Sbjct 3332 GTAAGTCCAGGCATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGCAAAGCTCCCACTG 3391
Query 50074 AAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC-GCTGTC 50132
|||||||| ||||| || || ||||| |||| || | || ||| | |||| || ||
Sbjct 3392 AAGAAGATGCCTTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTGGCAGCCTTC 3451
Query 50133 --ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 50190
| ||||| ||||||| || |||||| || ||| ||||||||||| |||
Sbjct 3452 GAAGAGATCCAAGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATCGTTTCAATG 3511
Query 50191 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 50250
||||| |||||||||| | | || | ||| | | ||| || || || | | |||
Sbjct 3512 GCATTGAAGAGATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACACTG 3571
Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310
|||||||| ||||| | || || ||||| ||||| || || || || || | ||||||
Sbjct 3572 TACATTTCGGAATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCG 3631
Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370
|| | |||||||||| | ||| ||||| | | |||||| || || ||||| |||
Sbjct 3632 GTCACCTGCACTTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCAGAA 3691
Query 50371 GCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTC 50430
|| ||||| || ||||| ||||| ||| ||||| || || || || || |
Sbjct 3692 GCAGCAAAGAAGGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTGGCC 3751
Query 50431 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 50490
|||||| | || || || || | ||| |||||||| || ||||| || ||||| || |||
Sbjct 3752 CAATCAGTCATGTCCTTGGACAGATCCACTTCTTCGACGGTCCAGAACGATGCTTCAGCC 3811
Query 50491 TTTT 50494
| ||
Sbjct 3812 TGTT 3815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 717854852712200
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