Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 98.7 8e-16 >SEQ10860 Length=7223 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 42900 CACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTC 42959 |||||| || | || ||| ||||| | |||||||||||| | || || | || || Sbjct 1471 CACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTC 1530 Query 42960 CAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCT 43019 |||||| ||||||||||| ||||| ||||||||||| | || | |||||||| || || Sbjct 1531 CAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTC-CT 1589 Query 43020 G-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTT 43078 | ||| ||||||| | ||| || || | ||||| || | || || || | Sbjct 1590 GAATCTTGGCTTTGACATTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCT 1649 Query 43079 TTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || || || ||||| || || |||||||| Sbjct 1650 TACCCGTGAGGGTTTTAACGAAGATTTGCAT 1680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381155306634090