Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_004684.1 Length=67480 Score E Sequences producing significant alignments: (Bits) Value SEQ24884 150 8e-32 >SEQ24884 Length=1939 Score = 150 bits (166), Expect = 8e-32 Identities = 272/391 (70%), Gaps = 24/391 (6%) Strand=Plus/Minus Query 41644 GCGCAGGTCGGCCACGAGTCCGGCGGCCTGAAATACCAGGAGGAGATCGCCTCCGGTGCG 41703 |||||| |||| |||||||| | || || ||| |||||| ||||| ||| || Sbjct 1425 GCGCAGATCGGTCACGAGTCGGCGGGACTCCGGTACATGGAGGAACTCGCCGACGGCTCG 1366 Query 41704 GCGTACGAAGGCCGGGCCGACCTCGGCAACACCCAGCGCGGCGACGGCGTGCGGTTCAAG 41763 || ||||| || || |||||||||||||||| |||| ||| || || | |||||||| Sbjct 1365 GCCTACGAGGGGCGCTCCGACCTCGGCAACACGCAGCCCGGTGATGGGCAGAGGTTCAAG 1306 Query 41764 GGACGCGACTTCATCCAGATCACCGGGCGGTCCAACTACACCCGGTTGAGCCAGTGGGCG 41823 || || | |||||| ||||||||||| | |||| | ||| | | ||||||| Sbjct 1305 GGGTCCGGCCCGATCCAGCTCACCGGGCGGGCGAACTTCCGGGCGTTCACTCGGTGGGCG 1246 Query 41824 TACGGACGCGGCCAGGTGCCGA--CGCCGAC--GTTCTTCGTGGACCACCCGGAG----- 41874 | || | |||| || | ||||| | ||||| || || |||||| Sbjct 1245 CA-----GCAG-CAGG----GATTCACCGACCTGGACTTCGAGGCGCAGCCGGAGCTGGT 1196 Query 41875 GCGCTGGCCACCGACGCGTACGCGTTCCTCGGCGTGGTCTGGTACTGGACGCAGGCCCGC 41934 ||||| | | | ||| || | |||||||| || | ||||||||||||| |||||| Sbjct 1195 GCGCTCG-GATCCACG-GTGGGGGTTCCTCGCCGCGTCCTGGTACTGGACGGTCGCCCGC 1138 Query 41935 ---GACATGAACGCGCTGGCCGACCGCGACGACATCGTGGCCGTGACCAAGGCGGTCAAC 41991 || | ||||||| | ||| || || |||||||||| ||| | || ||||| Sbjct 1137 CCGAACCTCAACGCGCAGTGCGATGCGGATGATGTCGTGGCCGTCACCCGGTCGATCAAC 1078 Query 41992 GGCGGCACCAACGGCCTGGAGGACCGCAAGG 42022 ||||| ||||||||||||| |||||| |||| Sbjct 1077 GGCGGAACCAACGGCCTGGCGGACCGGAAGG 1047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 215689934675105