Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_004684.1
Length=67480
Score E
Sequences producing significant alignments: (Bits) Value
SEQ24884 150 8e-32
>SEQ24884
Length=1939
Score = 150 bits (166), Expect = 8e-32
Identities = 272/391 (70%), Gaps = 24/391 (6%)
Strand=Plus/Minus
Query 41644 GCGCAGGTCGGCCACGAGTCCGGCGGCCTGAAATACCAGGAGGAGATCGCCTCCGGTGCG 41703
|||||| |||| |||||||| | || || ||| |||||| ||||| ||| ||
Sbjct 1425 GCGCAGATCGGTCACGAGTCGGCGGGACTCCGGTACATGGAGGAACTCGCCGACGGCTCG 1366
Query 41704 GCGTACGAAGGCCGGGCCGACCTCGGCAACACCCAGCGCGGCGACGGCGTGCGGTTCAAG 41763
|| ||||| || || |||||||||||||||| |||| ||| || || | ||||||||
Sbjct 1365 GCCTACGAGGGGCGCTCCGACCTCGGCAACACGCAGCCCGGTGATGGGCAGAGGTTCAAG 1306
Query 41764 GGACGCGACTTCATCCAGATCACCGGGCGGTCCAACTACACCCGGTTGAGCCAGTGGGCG 41823
|| || | |||||| ||||||||||| | |||| | ||| | | |||||||
Sbjct 1305 GGGTCCGGCCCGATCCAGCTCACCGGGCGGGCGAACTTCCGGGCGTTCACTCGGTGGGCG 1246
Query 41824 TACGGACGCGGCCAGGTGCCGA--CGCCGAC--GTTCTTCGTGGACCACCCGGAG----- 41874
| || | |||| || | ||||| | ||||| || || ||||||
Sbjct 1245 CA-----GCAG-CAGG----GATTCACCGACCTGGACTTCGAGGCGCAGCCGGAGCTGGT 1196
Query 41875 GCGCTGGCCACCGACGCGTACGCGTTCCTCGGCGTGGTCTGGTACTGGACGCAGGCCCGC 41934
||||| | | | ||| || | |||||||| || | ||||||||||||| ||||||
Sbjct 1195 GCGCTCG-GATCCACG-GTGGGGGTTCCTCGCCGCGTCCTGGTACTGGACGGTCGCCCGC 1138
Query 41935 ---GACATGAACGCGCTGGCCGACCGCGACGACATCGTGGCCGTGACCAAGGCGGTCAAC 41991
|| | ||||||| | ||| || || |||||||||| ||| | || |||||
Sbjct 1137 CCGAACCTCAACGCGCAGTGCGATGCGGATGATGTCGTGGCCGTCACCCGGTCGATCAAC 1078
Query 41992 GGCGGCACCAACGGCCTGGAGGACCGCAAGG 42022
||||| ||||||||||||| |||||| ||||
Sbjct 1077 GGCGGAACCAACGGCCTGGCGGACCGGAAGG 1047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 215689934675105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |