Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value SEQ45605 143 4e-29 seq9788 91.5 2e-13 >SEQ45605 Length=728 Score = 143 bits (158), Expect = 4e-29 Identities = 240/347 (69%), Gaps = 0/347 (0%) Strand=Plus/Plus Query 8888 GACGCATGGAAAGAACTGACTGGCTACGGATTCAGTCTATACAGCACGCCAAGCGAATCG 8947 ||||| |||||||| ||| |||||||| ||||| || ||||||||||| |||||| Sbjct 349 GACGCCTGGAAAGACGAGACCGGCTACGGCTTCAGCCTCTACAGCACGCCGAGCGAAAAC 408 Query 8948 CTATGTGATCGTTTCTGTCGTCTCGATCAAGAGAAATACGGTATCATTACGGGTATCAAC 9007 || || ||||| ||||| || || || | ||| ||| | |||| ||| | Sbjct 409 CTGTGCGATCGCTTCTGCCGGCTGGACACCGCCGAATTCGGCGTGGGGCCGGGCGTCACC 468 Query 9008 GACAAAGACTATTACACGAACTCGTTTCACTTAGATGTGTTCAAGAAAGTGAATCCGTTC 9067 ||||| | ||||||||| ||| || ||| | || ||| ||||| || ||||||| | Sbjct 469 GACAAGGGCTATTACACCAACAGCTTCCACCTCGACGTGGAGAAGAAGGTCAATCCGTAC 528 Query 9068 GAGAAGATTGATTTCGAAGCAGCATACCCAATTCATGCGAATGGTGGTTTCATCTGCTAT 9127 || ||| | || |||||||| | ||||| || | || || ||||||||||| Sbjct 529 GACAAGCTGGACTTCGAAGCGCCCTACCCGCCGTTGGCCAGCGGCGGCTTCATCTGCTAC 588 Query 9128 GCTGAATTCCCGAACATGCGAGACAACATCAAAGGTCTAGAGCGCGTATGGGATTACGCA 9187 | || | ||||||| ||| ||||| | || | || || ||| ||||| ||| Sbjct 589 GGCGAGTACCCGAACCTGCAGCACAACCTGAAGGCGCTGGAAGACGTGTGGGACTACAGC 648 Query 9188 TATAAGAAAGTTGCGTACTTCGGCACAAACACGCCGATTGACCAGTG 9234 || | || | |||| |||||| ||||||||||| ||| |||| Sbjct 649 TACACCCGGGTGCCTTACTACGGCACCAACACGCCGATCGACGAGTG 695 >seq9788 Length=772 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 70975 TGTGAGCATCACATCGTAACAATCGACGGCTTTGCCACTGTCGCATACATTCCGAAGAAC 71034 ||||| || ||| |||| || ||||||||| ||||| || || || || |||| | Sbjct 416 TGTGAACACCACTTCGTCACCATCGACGGCAAGGCCACCGTGGCCTATATCCCGACAGCC 357 Query 71035 AAAGTTCTTGGTCTGTCGAAAATGAATCGCATCGTTGAGTACTTCGCTCGTCGTCCGCAG 71094 || || ||||||||||| || || ||||| || ||| |||| | | ||||||| | Sbjct 356 TCGGTGCTCGGTCTGTCGAAGATCAACCGCATTGTGCAGTTCTTCTCCCAGCGTCCGCTG 297 Query 71095 ATTCAAGAACGTCTGACTGTTCAAATCGCTGAAGCACTGAAGTTCATTCTTGAAACTGAA 71154 | ||||| || ||||| || ||| | || ||| || | | || | || | Sbjct 296 TTGCAAGAGCGCCTGACCCAGCAGATCCTGGTGGCGCTGCAGACCCTGCTCGGCACCAAT 237 Query 71155 GACGTAGCGGTATTGATCGACGCCAAACACTATTGCGTGAAAGCACGCGG 71204 |||| ||||||| |||||| || || ||||| || ||||| ||||| Sbjct 236 AACGTGGCGGTATCGATCGATGCAGTCCATTATTGTGTCAAAGCGCGCGG 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 782889350905200