Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_005083.2
Length=244834
Score E
Sequences producing significant alignments: (Bits) Value
SEQ45605 143 4e-29
seq9788 91.5 2e-13
>SEQ45605
Length=728
Score = 143 bits (158), Expect = 4e-29
Identities = 240/347 (69%), Gaps = 0/347 (0%)
Strand=Plus/Plus
Query 8888 GACGCATGGAAAGAACTGACTGGCTACGGATTCAGTCTATACAGCACGCCAAGCGAATCG 8947
||||| |||||||| ||| |||||||| ||||| || ||||||||||| ||||||
Sbjct 349 GACGCCTGGAAAGACGAGACCGGCTACGGCTTCAGCCTCTACAGCACGCCGAGCGAAAAC 408
Query 8948 CTATGTGATCGTTTCTGTCGTCTCGATCAAGAGAAATACGGTATCATTACGGGTATCAAC 9007
|| || ||||| ||||| || || || | ||| ||| | |||| ||| |
Sbjct 409 CTGTGCGATCGCTTCTGCCGGCTGGACACCGCCGAATTCGGCGTGGGGCCGGGCGTCACC 468
Query 9008 GACAAAGACTATTACACGAACTCGTTTCACTTAGATGTGTTCAAGAAAGTGAATCCGTTC 9067
||||| | ||||||||| ||| || ||| | || ||| ||||| || ||||||| |
Sbjct 469 GACAAGGGCTATTACACCAACAGCTTCCACCTCGACGTGGAGAAGAAGGTCAATCCGTAC 528
Query 9068 GAGAAGATTGATTTCGAAGCAGCATACCCAATTCATGCGAATGGTGGTTTCATCTGCTAT 9127
|| ||| | || |||||||| | ||||| || | || || |||||||||||
Sbjct 529 GACAAGCTGGACTTCGAAGCGCCCTACCCGCCGTTGGCCAGCGGCGGCTTCATCTGCTAC 588
Query 9128 GCTGAATTCCCGAACATGCGAGACAACATCAAAGGTCTAGAGCGCGTATGGGATTACGCA 9187
| || | ||||||| ||| ||||| | || | || || ||| ||||| |||
Sbjct 589 GGCGAGTACCCGAACCTGCAGCACAACCTGAAGGCGCTGGAAGACGTGTGGGACTACAGC 648
Query 9188 TATAAGAAAGTTGCGTACTTCGGCACAAACACGCCGATTGACCAGTG 9234
|| | || | |||| |||||| ||||||||||| ||| ||||
Sbjct 649 TACACCCGGGTGCCTTACTACGGCACCAACACGCCGATCGACGAGTG 695
>seq9788
Length=772
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 70975 TGTGAGCATCACATCGTAACAATCGACGGCTTTGCCACTGTCGCATACATTCCGAAGAAC 71034
||||| || ||| |||| || ||||||||| ||||| || || || || |||| |
Sbjct 416 TGTGAACACCACTTCGTCACCATCGACGGCAAGGCCACCGTGGCCTATATCCCGACAGCC 357
Query 71035 AAAGTTCTTGGTCTGTCGAAAATGAATCGCATCGTTGAGTACTTCGCTCGTCGTCCGCAG 71094
|| || ||||||||||| || || ||||| || ||| |||| | | ||||||| |
Sbjct 356 TCGGTGCTCGGTCTGTCGAAGATCAACCGCATTGTGCAGTTCTTCTCCCAGCGTCCGCTG 297
Query 71095 ATTCAAGAACGTCTGACTGTTCAAATCGCTGAAGCACTGAAGTTCATTCTTGAAACTGAA 71154
| ||||| || ||||| || ||| | || ||| || | | || | || |
Sbjct 296 TTGCAAGAGCGCCTGACCCAGCAGATCCTGGTGGCGCTGCAGACCCTGCTCGGCACCAAT 237
Query 71155 GACGTAGCGGTATTGATCGACGCCAAACACTATTGCGTGAAAGCACGCGG 71204
|||| ||||||| |||||| || || ||||| || ||||| |||||
Sbjct 236 AACGTGGCGGTATCGATCGATGCAGTCCATTATTGTGTCAAAGCGCGCGG 187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 782889350905200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |