Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq2872 107 2e-18
>seq2872
Length=9359
Score = 107 bits (118), Expect = 2e-18
Identities = 345/533 (65%), Gaps = 2/533 (0%)
Strand=Plus/Plus
Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213
||||| ||||| |||| |||||||| | | || | ||||| || ||||| || ||
Sbjct 3281 GCAAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAATGTAAGTCCA 3340
Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATT 13273
|||||||| || || || || | ||| || || | ||||| || || || ||
Sbjct 3341 GGCATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGCAAAGCTCCCACTGAAGAAGATG 3400
Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATC 13333
|||||||| || ||||| || || | | ||||||| | | | || |||
Sbjct 3401 CCTTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTGGCAGCCTTCGAAGAGATC 3460
Query 13334 CACTTTCTGGCCCAGTTTGCTTTTTGTTTAAC-GCAGTTCATATTTTCTATTGCGTTAAA 13392
|| ||||||| ||| || | ||||| || | ||| |||| || || || ||
Sbjct 3461 CAAGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGG-CATCGTTTCAATGGCATTGAA 3519
Query 13393 TAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTC 13452
| ||| | | | | | || ||||| || || || | | || ||||||||
Sbjct 3520 GAGATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACACTGTACATTTC 3579
Query 13453 TGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTG 13512
||||| | ||| ||||| || || ||||| |||||||| || | ||||| | |||||
Sbjct 3580 GGAATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCGGTCACCTG 3639
Query 13513 AACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaa 13572
||||| | ||| | ||| | | ||||||||||| || || ||| |||||||||
Sbjct 3640 CACTTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCAGAAGCAGCAAA 3699
Query 13573 aaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTTAACCAATCTGG 13632
|| || | | ||| || || | || || || | | ||| |||||| |
Sbjct 3700 GAAGGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTGGCCCAATCAGT 3759
Query 13633 AAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCT 13685
| || || || | ||| || || || |||||||| || || || ||||||
Sbjct 3760 CATGTCCTTGGACAGATCCACTTCTTCGACGGTCCAGAACGATGCTTCAGCCT 3812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430740228969210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |