Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value SEQ11799 113 4e-20 >SEQ11799 Length=6542 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||| ||||| || | || || || || || || ||| |||||||||||| | | Sbjct 4347 GCGTTCGCAAATGAATTGGGCAATGCGATCACCACGCTTCACCTCGAAATCGGCATCGGA 4288 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||||| || || || | |||||||| ||||| | |||| ||||| || || Sbjct 4287 GTGATTGAACAGTACAACACCTAGATTGCCGCGATAGTCCTCATCTACAACGCCGGCTCC 4228 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCC 5760 |||||||||||||| ||| || |||| ||| ||||| || ||||| ||||| || | || Sbjct 4227 CACGTCGATGAAGTTCTTCACAGCCAAGCCAGAGCGTGGCGCCACACGGCCATAAGAGCC 4168 Query 5761 ATCGGGAAGCTGTATCTGCAGGTCCGT 5787 || || | || | |||||| || || Sbjct 4167 CTCTGGCACTTGGACCTGCAGATCAGT 4141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429812750416760