Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq3808 100 2e-16 >seq3808 Length=15542 Score = 100 bits (110), Expect = 2e-16 Identities = 128/175 (73%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 25428 GGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGT 25487 ||||| || |||| || || || |||| ||||||| ||||||||||| || || || Sbjct 5927 GGTTCCACATGATTAAGATACACATGAGAATCTCCCATGGTGTGGACAAAGTCACCAGGC 5868 Query 25488 TCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAG 25547 | | ||||| || | || |||||||| ||||| || || |||||||||||| Sbjct 5867 TTCAATCCGGTCACATGGGCAATCATGTAGGTGAGCAGCGCATAAGAGGCGATGTTAAAA 5808 Query 25548 GGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCT 25602 || ||||||| ||||||||| | | | |||||| || ||||| ||||| ||| Sbjct 5807 GGAACCCCGAGCCCCATGTCTGCAC-TTCGCTGGTACAGATGACAGGAGAGTTCT 5754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339946475088165