Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_005857.1 Length=51601 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 179 1e-40 >SEQ43492 Length=1174 Score = 179 bits (198), Expect = 1e-40 Identities = 286/409 (70%), Gaps = 10/409 (2%) Strand=Plus/Minus Query 13842 GAAGGTGATCTGCGTACCATCCATCCGCGCGGAGAGCTGCCCCTCATCGAGCGACCGTTC 13901 || ||||| || | || ||| |||||||| || |||| | || | || | | || Sbjct 908 GAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGTC 849 Query 13902 GTGCTTGGTCACTATGATTGCTGGGGTCTGGTGATGAGCTACTTTCGGCAGACCCACGGC 13961 ||||| || || || |||||||| ||| | |||||||| || |||||| |||||| Sbjct 848 GTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGGC 789 Query 13962 ATCGAGTTGCACGATTATCGCGTCGATTATCCCTGGTGGGAAAATAACTATCCCGACAAT 14021 || | | | || ||||| ||||| |||||||| |||||||| | || ||| Sbjct 788 ATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAAT 735 Query 14022 TTCTACCACGATTGCTGGTATGAATGTGGTTTCCGTGAATTTGATGGCCCGCCGCAGCCG 14081 ||||| || |||| | || || ||||| || || || || ||||| ||| |||| Sbjct 734 CTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCCG 675 Query 14082 GGTGATATGGTTATCATGCAGGTGCAGTCGGACAAGTGG--AACCATGCCGGGATTCTGC 14139 ||||| ||||| || |||| ||| || || |||| ||||||||||| ||||||| Sbjct 674 GGTGACATGGTGATTATGCTGGTTTC--CGCACCGGTGGCGAACCATGCCGGTATTCTGC 617 Query 14140 TGGAAGGGAACATGCTGCTGCACCATCTATATGGCCACCTCAGCCAGCGCGTGCCGTATG 14199 | |||| ||| |||||| ||| | || ||| || |||||||| ||||| || | Sbjct 616 TTGAAGATGGTATGTTGCTGCCCCACATGTACGGCATGCTGAGCCAGCGGGTGCCTTACG 557 Query 14200 GCGGTTACTGGAAGGATAGAACAATGAAGATTCTGCGTTATAAAGAACT 14248 | ||||| ||||| || |||| ||||| | ||||| | ||||| || Sbjct 556 GTGGTTATTGGAAAGAGCGAACTGTGAAGGTGCTGCGCCACAAAGAGCT 508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164911262139630