Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value SEQ13822 118 6e-22 SEQ23390 114 7e-21 seq2526 107 1e-18 seq7623 104 1e-17 seq6860 87.8 9e-13 >SEQ13822 Length=1720 Score = 118 bits (130), Expect = 6e-22 Identities = 73/79 (92%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 1115 AAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 1174 Query 11513 AACTGAGCTAATGGGCCGT 11531 ||||||||||||||||||| Sbjct 1175 AACTGAGCTAATGGGCCGT 1193 >SEQ23390 Length=3215 Score = 114 bits (126), Expect = 7e-21 Identities = 74/82 (90%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 738 AAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 679 Query 11513 AACTGAGCTAATGGGCCGTCGA 11534 | ||||||||||||||||| || Sbjct 678 AGCTGAGCTAATGGGCCGTTGA 657 >seq2526 Length=32362 Score = 107 bits (118), Expect = 1e-18 Identities = 87/102 (85%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 11430 AATATAG-AATTAATAAAAAATCAAATT-GGCCCATGAAAGGATCGAACCTTCGACCTTC 11487 || |||| || ||| ||||||| | || |||||||| |||||||||| |||||||| Sbjct 2347 AAAATAGTAAATAA-AAAAAATGATGTTTGGCCCATGGGGGGATCGAACCCGCGACCTTC 2289 Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||| |||| ||||||||||||||| Sbjct 2288 GCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATGGGCC 2247 >seq7623 Length=6795 Score = 104 bits (114), Expect = 1e-17 Identities = 76/88 (86%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAATT--GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 ||||||||| || |||||||| |||||||||| || ||||||||||||||||||| Sbjct 1461 AAAAAATCACTTTCTGGCCCATGGGGGGATCGAACCCGCGGCCTTCGCGTTATTAGCACG 1520 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||| ||||||||||||||| Sbjct 1521 ACGCTCTAACCAGCTGAGCTAATGGGCC 1548 >seq6860 Length=6003 Score = 87.8 bits (96), Expect = 9e-13 Identities = 74/91 (81%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATT--GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 || |||||| ||||| ||||||||| ||| |||||| || | | |||||||||||| Sbjct 1562 AAAAAAAAAAAAAATTTTGGCCCATGAGGGGAACGAACCCGCGCCATACGCGTTATTAGC 1621 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||| ||| || ||||||||||||||||||| Sbjct 1622 ACGCCGCACTACCCAACTGAGCTAATGGGCC 1652 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261344266868980