Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 118 9e-22 seq4983 111 1e-19 seq4710 102 7e-17 >SEQ10860 Length=7223 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| ||||| || ||||| | || |||||| | |||| ||| || Sbjct 1471 CACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTC 1530 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || || || ||| ||||||| || | || |||||||||||||| ||||||||||| | Sbjct 1531 CAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTG 1590 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || || ||||| | | || || | | ||||| |||| |||||||| || Sbjct 1591 AATCTTGGCTTTGACATTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTT 1650 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| || ||||| ||||| Sbjct 1651 ACCCGTGAGGGTTTTAACGAAGATTTGCAT 1680 >seq4983 Length=3163 Score = 111 bits (122), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||| | || || ||||| || | ||| || ||| | || || || ||| Sbjct 661 CACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGG--AGAGGGTACGACCATCT 718 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||| ||| |||||| | ||||| || | ||||||||||| |||||||| || ||||| Sbjct 719 TCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCC 778 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || ||||||||| ||| || |||| | | || || || | || ||||| Sbjct 779 TGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAACCTCCAAGGTAATGGTC 838 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| | || || |||||||||||||| Sbjct 839 TTGCCAGTCAATGTCTTTACAAAGATCTGCAT 870 >seq4710 Length=78879 Score = 102 bits (112), Expect = 7e-17 Identities = 153/216 (71%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAG-TAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 |||| |||||||||||| | | || ||||| || | ||| || || || |||| Sbjct 8615 CGCAGCACCAAGTGCAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGACAGAGTGCGACC 8674 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||||||| || || | ||||| | | ||||||||||| || || ||||| || Sbjct 8675 ATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTT 8734 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||| || | | || |||| | || || || | ||||| Sbjct 8735 GTCTTGGATCTTAGCCTTCACATTCTCAATGGTATCAGATGGCTCCACCTCCAGGGTGAT 8794 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| |||||||| || || ||||| ||||| ||||| Sbjct 8795 GGTCTTTCCAGTCAGGGTCTTCACGAAGATTTGCAT 8830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448032844177800