Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq7678 91.5 3e-14 seq110 86.0 1e-12 >seq7678 Length=850 Score = 91.5 bits (100), Expect = 3e-14 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 6187 TCTTCAATAATTGACATGATTTCATTCGTGTGACTTGGGTTTCCAGCAGCTTGAGATGCC 6246 |||||||| ||||| | |||||||| || ||| | | |||||||| | |||||| || Sbjct 842 TCTTCAATTATTGATGTAATTTCATTAGTATGATTCGTATTTCCAGCTGTTTGAGAGGCA 783 Query 6247 ATCAGTAGTCGCAAACGATCAACTAGCTCATTTGGATCATCCCAGTAAACATAAT 6301 || | ||| | || || ||||| | |||||||||||| ||||| || ||||||| Sbjct 782 ATTAAGAGTTGTAATCGTTCAACCAACTCATTTGGATCGTCCCAATATACATAAT 728 >seq110 Length=3876 Score = 86.0 bits (94), Expect = 1e-12 Identities = 192/288 (67%), Gaps = 3/288 (1%) Strand=Plus/Plus Query 7940 AACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGTTATCAGTACTGCGGT 7999 ||||||||||| || || || |||| ||| ||||| || || | ||||| || Sbjct 2851 AACAATATAATAGACTCTCTACCTTTTGAGGCTCATATACCTGGATACAATTACTGTGGA 2910 Query 8000 CCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGTATAAATCCTTTGGAC 8059 || || |||||||||| || ||||||| || |||||| || || ||| |||||| Sbjct 2911 CCTGGAACAAAGTTAGAGAAACGATTAGCACGTGGTGATCGTGGAATTAATGGTTTGGAT 2970 Query 8060 GCTGCGTGTAAGGAACACGATATAGCTTACTCAAAAAATCGTGAAAATTTGGAAGCTCGT 8119 | ||||||| || || ||||| || || ||||| | || || | ||| | ||| Sbjct 2971 GAAGCGTGTAGAGAGCATGATATTGCATATTCAAACA---GTAAAGAGTTGAGTGAACGT 3027 Query 8120 CACGAGGCTGATAAAATTCTTGCTGAGAAAGCGTGGCAACGATTTCAAGCGAGAGACGCT 8179 || | ||||| | || | ||| || || ||| | || | ||||| |||| | Sbjct 3028 CATAAAGCTGACTCAGTTTTAATTGAAAAGGCTTGGAATCGTGTAAAAGCGTTAGACAGT 3087 Query 8180 GCTATTGGTGAAAAAGCTGCTGCTTGGAGTGTAAATAAAATCATGAAG 8227 |||||| || | ||| || || | ||||| || || |||||| Sbjct 3088 AGTATTGGAGAGAGAGCAGCAGCATACTTTGTAACAAACATGATGAAG 3135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97920759322170