Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq7678 91.5 3e-14
seq110 86.0 1e-12
>seq7678
Length=850
Score = 91.5 bits (100), Expect = 3e-14
Identities = 89/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 6187 TCTTCAATAATTGACATGATTTCATTCGTGTGACTTGGGTTTCCAGCAGCTTGAGATGCC 6246
|||||||| ||||| | |||||||| || ||| | | |||||||| | |||||| ||
Sbjct 842 TCTTCAATTATTGATGTAATTTCATTAGTATGATTCGTATTTCCAGCTGTTTGAGAGGCA 783
Query 6247 ATCAGTAGTCGCAAACGATCAACTAGCTCATTTGGATCATCCCAGTAAACATAAT 6301
|| | ||| | || || ||||| | |||||||||||| ||||| || |||||||
Sbjct 782 ATTAAGAGTTGTAATCGTTCAACCAACTCATTTGGATCGTCCCAATATACATAAT 728
>seq110
Length=3876
Score = 86.0 bits (94), Expect = 1e-12
Identities = 192/288 (67%), Gaps = 3/288 (1%)
Strand=Plus/Plus
Query 7940 AACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGTTATCAGTACTGCGGT 7999
||||||||||| || || || |||| ||| ||||| || || | ||||| ||
Sbjct 2851 AACAATATAATAGACTCTCTACCTTTTGAGGCTCATATACCTGGATACAATTACTGTGGA 2910
Query 8000 CCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGTATAAATCCTTTGGAC 8059
|| || |||||||||| || ||||||| || |||||| || || ||| ||||||
Sbjct 2911 CCTGGAACAAAGTTAGAGAAACGATTAGCACGTGGTGATCGTGGAATTAATGGTTTGGAT 2970
Query 8060 GCTGCGTGTAAGGAACACGATATAGCTTACTCAAAAAATCGTGAAAATTTGGAAGCTCGT 8119
| ||||||| || || ||||| || || ||||| | || || | ||| | |||
Sbjct 2971 GAAGCGTGTAGAGAGCATGATATTGCATATTCAAACA---GTAAAGAGTTGAGTGAACGT 3027
Query 8120 CACGAGGCTGATAAAATTCTTGCTGAGAAAGCGTGGCAACGATTTCAAGCGAGAGACGCT 8179
|| | ||||| | || | ||| || || ||| | || | ||||| |||| |
Sbjct 3028 CATAAAGCTGACTCAGTTTTAATTGAAAAGGCTTGGAATCGTGTAAAAGCGTTAGACAGT 3087
Query 8180 GCTATTGGTGAAAAAGCTGCTGCTTGGAGTGTAAATAAAATCATGAAG 8227
|||||| || | ||| || || | ||||| || || ||||||
Sbjct 3088 AGTATTGGAGAGAGAGCAGCAGCATACTTTGTAACAAACATGATGAAG 3135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97920759322170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |