Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq61 260 4e-64 seq2872 86.0 2e-11 >seq61 Length=55249 Score = 260 bits (288), Expect = 4e-64 Identities = 1117/1750 (64%), Gaps = 43/1750 (2%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 |||||||| | || | ||||| |||||||| ||| | ||| | || || ||||| ||| Sbjct 26222 ATCAATGGCAAAATCGCCGAACGTCCGCAGCACATGCTGATGAGAGTGGCGATTGGAATC 26281 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 ||| || || | ||| |||| | || || || || || || | || || Sbjct 26282 CATGGCGAAGACATCGATTCCGCTGTCGAGACTTACAATCTGTTATCGGAACGCTATTTT 26341 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 ||||| || ||||||| | | ||||| || | ||| |||||||| || || Sbjct 26342 ACGCATGCATCGCCAACGTTATTTGCTGCTGCCACCAATCGTCCCCAGATGTCATCGTGT 26401 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 || ||| ||| |||| |||||||||||| || || || | | | || | ||| Sbjct 26402 TTCCTTTTAACAATGGTTTCCGATTCCATCGAAGGCATTTTCAAGTCCGTCGAGCAGTGT 26461 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGT--TCGTGCAC 363727 || | || ||||| || || || ||||| | | || || ||| |||||| Sbjct 26462 GCAATGATCTCCAAATCCGCTGGTGGCATTGGGCT--CAATGTGCATTGTATTCGTGCCA 26519 Query 363728 AGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTG 363787 || || | || | ||||| || || ||||| |||| |||||||| | | Sbjct 26520 AGGGCACCTCGATCTGTGGCACTAATGGCACTTCAAATGGTTTGGTGCCCATGCTCAGAG 26579 Query 363788 TGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTG 363847 ||||| | ||| || | || ||||| || ||||| || ||||| ||| || |||| Sbjct 26580 TGTTTAATAATGTGGCTCGTTATGTCGATCAAGGTGGCGGCAAGCGACCAGGCGCTTTTG 26639 Query 363848 CTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACA 363907 | || || || || ||| ||| ||||||| |||||||| | || ||| || |||| Sbjct 26640 CCATTTACCTGGAACCTTGGCATTCCGATATCTTTGAGTTCTTGGACCTCAAAAAGAACA 26699 Query 363908 CGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATT 363967 |||| || || || | || |||||||| ||||| || | ||| | | || | | Sbjct 26700 CGGGCAAGGAAGAGCACAGAGCTCGTGATCTCTTCTACGCCTTGTGGATACCCGATCTGT 26759 Query 363968 TTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAG 364027 |||||||||| |||||||| | || ||||||| || || || || ||| | ||||| | Sbjct 26760 TTATGAAGCGTGTGGAGGCCAATGAGGATTGGTCGCTGTTGTGTCCTCACAAGTGTCCCG 26819 Query 364028 GTCTTTCCGATGTATGGGGTGACGACTAT--GTTGCTCTATACGAAAAGTATGAATCGGA 364085 | | || || ||||| || |||| | | ||| ||||| |||||| || || Sbjct 26820 GCTTGGAAGACGTTTGGGGGGATGACTTTGAGAAGCTGTATAC--AAAGTACGAGAGCGA 26877 Query 364086 GGGAAAGGC---TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 ||| || |||| | ||| ||||| | || |||| |||||| | || || Sbjct 26878 GGGTCGCGCAAATCGTGTG---ATTAAAGCACAAACTCTTTGGTATGCCATTGTTGAATC 26934 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 || ||||||| || || || || ||| | | ||| || || |||||| | ||| ||| Sbjct 26935 TCAAGTTGAGACTGGCACTCCGTACATGCTCTTCAAGGACTCTTGCAACAGGAAGAGCAA 26994 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACAC 364262 |||||| | |||| || || | |||||||| || || || ||| ||||||| | Sbjct 26995 TCAGCAGAATGTTGGCACCATCAAATGCAGCAACCTCTGCACTGAAATTGTTGAATATTC 27054 Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA- 364321 || ||||| |||| |||||| || || | || ||||| || | |||||| | Sbjct 27055 GGCACCCGATGAGATTGCCGTCTGCAATTTGGCATCGATAGCCTTGAATATGTTTGTGAC 27114 Query 364322 --AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAA 364379 ||| || || || | || | || | || || || | || || | || Sbjct 27115 TTCAGAGAAAACATTCGATTTCAAGAAACTGAAGGAAGTTACTAAAACTGTCACCAGAAA 27174 Query 364380 TCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATAT 364439 | | |||| | || || | ||||| ||||| | || || || || || ||| | Sbjct 27175 TTTGAACAAAATCATTGATATCAATTACTATCCGCTGCCCGAGGCAAAGAAATCCAATTT 27234 Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499 | ||||| || ||||| |||| || |||||| | || |||| || || || | Sbjct 27235 AAGACATCGTCCCATTGGCATTGGCGTTCAGGGCTTTGCCGACGCCTTAATTCTGATGCG 27294 Query 364500 GATGGCATTTGATTCGCCTGAC---GCTCGTGTT-CTAAATAAGGAGATCTTTGAAACAA 364555 | | | ||| | |||| || ||| || || ||| || ||||||| ||||| | Sbjct 27295 TTTTCCCTATGA---GAGTGACAAAGC-CGTATTGCTCAATCAGCAGATCTTCGAAACCA 27350 Query 364556 TGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTA 364615 | || | || || | || ||||| |||| ||| | || || | Sbjct 27351 TCTACTATGGTGCCCTTGAGGCCAGTTGTGAGCTGGCTCAAAAGGACGGTCCCTATGAAA 27410 Query 364616 CTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGC 364675 | || | || | || | |||||| | |||| ||| | ||| | || | Sbjct 27411 CCTACGCTGGTTGTCCGGTGAGCAAGGGAATTCTGCAGTACGATATGTGGGACAAGACAC 27470 Query 364676 CATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCA 364735 | | || ||| | ||| | | ||| | || | || ||||||| | | | Sbjct 27471 CCACAAGCCTTTGGGATTGGACTGCTCTAAAATTGAAAATCAAAGAGCATGGCGTTAGAA 27530 Query 364736 ACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACG 364795 |||| || || ||| || ||||||||||| |||||||| |||||| | || || || | Sbjct 27531 ACTCGCTGCTTGTAGCTCCAATGCCCACGGCATCTACTGCCCAGATCATGGGTAATAATG 27590 Query 364796 AGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTC 364855 ||| ||| || |||| ||| || |||| | | || ||| | |||||||| || Sbjct 27591 AGTCCTTTGAGCCGTATACTTCAAACATTTACACCAGGCGCGTTTTGTCCGGAGAGTTCA 27650 Query 364856 CGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCA 364915 || || ||| | | | | |||| | |||| | | | |||| ||| || Sbjct 27651 ATGTGGTAAATCATCATTTGTTGCGGGATTTAACCGAACTAGATTTATGGGATGATGACA 27710 Query 364916 TGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACAT----TCCAGGATTTCCA 364971 ||||||| | ||||| ||| | ||| || | || ||||| |||| |||| Sbjct 27711 TGAAGAATCAAATCATTGCCAGTCGTGGCTCCATACAAAACATCGAATCCA----TTCCT 27766 Query 364972 GAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC--TCATTG 365029 | || | | | ||||||||||||| |||||||| || | ||| || ||| Sbjct 27767 CAGGAAGTACGGGATCTTTACAAAACCGTCTGGGAAATCTC--GGTGAAGTCAACCATCA 27824 Query 365030 ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--- 365086 | ||||| || ||||||||||||||||| ||||| || || || ||| ||||| Sbjct 27825 AGATGGCAGCTGATCGCGGTGCTTTTATTGACCAGAGTCAATCATTCAAC--ATTCACGT 27882 Query 365087 TGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTC 365146 || | | |||| || || |||| | |||||||| ||||||| | |||||| | || | Sbjct 27883 TGCCGAACCCAA-CTACGGCAAGTTAACATCCATTCATTTCTTCTCGTGGAAGGCAGGCC 27941 Query 365147 TTAAGACAGG 365156 | |||||||| Sbjct 27942 TCAAGACAGG 27951 >seq2872 Length=9359 Score = 86.0 bits (94), Expect = 2e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCT-GGAGCATTTTGTGC 22547 |||||| ||||||| ||||||| ||||||||||| ||||| | ||||| ||| | Sbjct 3432 GAACGTATTATTGCTTTTGCTGCTGTTGAAGGCATCTTCTTCAGTGGGAGC-TTTGCATC 3374 Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607 ||||| ||||| || || |||| | ||||||| || || || || || || || || || Sbjct 3373 CATCTTCTGGCTGAAGAAGCGTGGACTTATGCCTGGACTTACATTCTCCAACGAATTGAT 3314 Query 22608 TAGCCGAGATGAGGGTCTTCATACCGATTTTGCG 22641 || ||||| ||||| ||| || |||||| Sbjct 3313 CTCTCGCGATGAAGGTCTGCATTGTGACTTTGCG 3280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302583682554110