Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq61 183 3e-41
seq4710 129 6e-25
seq4983 118 1e-21
SEQ10860 107 2e-18
seq2624 91.5 1e-13
>seq61
Length=55249
Score = 183 bits (202), Expect = 3e-41
Identities = 718/1116 (64%), Gaps = 36/1116 (3%)
Strand=Plus/Minus
Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAG 145114
||||| || || | ||||| |||| ||| || || | || | ||| || || |
Sbjct 27663 TGATTTACCACATTGAACTCTCCGGACAAAACGCGCCTGGTGTAAATGTTTGAAGTATAC 27604
Query 145115 GGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCC 145174
|| ||||| ||||| ||||| |||| ||| || || || | ||| |||||||| ||
Sbjct 27603 GGCTCAAAGGACTCATTATTACCCATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCT 27544
Query 145175 ACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCC 145234
|| | | || || | | ||| |||| ||||| | ||||| | | |||||||
Sbjct 27543 ACAAGCAGCGAGTTTCTAACGCCATGCTCTTTGATTTTCAATTTTAGAGCAGTCCAATCC 27484
Query 145235 CATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGG 145294
|| || || || || ||||||||| |||||||||| ||| |||| ||| | ||
Sbjct 27483 CAAAGGCTTGTGGGTGTCTTGTCCCACATATCGTACTGCAGAATTCCCTTGCTCACCGGA 27424
Query 145295 CTGCCTTGAAAGGAACTGTA---ACTGCCCCAAGTTTTG-GCGAGCTCGCAACTCGCCTC 145350
| || ||| || || | || ||||| || ||||| ||||| |||||
Sbjct 27423 CAACCAGCGTAGGTTTCATAGGGACCGTCC----TTTTGAGCCAGCTCACAACTGGCCTC 27368
Query 145351 CAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCT 145410
|| || || | || || || ||| || ||| ||||||| | |||| || ||
Sbjct 27367 AAGGGCACCATAGTAGATGGTTTCGAAGATCTGCTGATTGAGCAATACGGCTTTGTCACT 27308
Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470
||| || || | |||| ||| | || || ||||| | ||||| | || | ||| ||
Sbjct 27307 CTCATAGGGAAAACGCATCAGAATTAAGGCGTCGGCAAAGCCCTGAACGCCAATGCCAAT 27248
Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATATCGATTACGGTC 145527
||| |||||| | | ||| || | ||| ||| | ||||| ||| ||
Sbjct 27247 GGGACGATGTCTTAAATTGGATTTCTTTGCC---TCGGGCAGCGGATAGTAATTGATATC 27191
Query 145528 GATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTC 145587
|| ||||| ||||| |||| || || |||| | | || || | || ||
Sbjct 27190 AATGATTTTGTTCAAATTTCTGGTGACAGTTTTAGTAACTTCCTTCAGTTTCTTGAAATC 27131
Query 145588 AAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAAC 145647
|| ||| | || || ||| |||| | ||| ||||| |||||||| || ||
Sbjct 27130 GAATGTTTTCTC-TGAAGTCACAAACA--TATTCAAGGCTATCGATGCCAAATTGCAGAC 27074
Query 145648 TGCCGTCTCCTCGGCGTCGCTG--TATTGTACGATCTCGGCGCACAAATTGCTACATTTG 145705
|| |||| |||| || || | |||| || || || | ||| | ||||| ||||||
Sbjct 27073 GGCAATCTCATCGG-GT-GCCGAATATTCAACAATTTCAGTGCAGAGGTTGCTGCATTTG 27016
Query 145706 ATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTAC 145765
||||| || | ||| |||||||| || ||||||||||| | ||||||| |||||||||||
Sbjct 27015 ATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGTCCTTGAAGAGCATGTAC 26956
Query 145766 GGTCCGCCAGTCTCCACCTGCGTCTCCAC-----GATAAAACGGTGCAAGTCCTGCGCAC 145820
|| ||||||||| || || | || || ||| | | | || || |
Sbjct 26955 GGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAAGAGTTTGTGCTTTAATC 26896
Query 145821 GCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGG 145880
||| ||| ||| ||||| ||||| || | || |||| |||||| |
Sbjct 26895 ACACGATTTGC-----GCGACCCTCGCTCTCGTACTTTGTATACAGCTTCTCAAAGTCAT 26841
Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940
|| | || || |||||||||||||| ||||||| ||||||||| | | |
Sbjct 26840 CCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAGCGACCAATCCTCAT 26781
Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCG 146000
|||| | || |||| |||||||| ||| || | ||||| ||||| | | || || |
Sbjct 26780 TGGCCTCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTAGAAGAGATCACGAG 26721
Query 146001 CTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAAT-TAAGCACACTATAGATGTCCGCG 146059
|| || || || ||| |||| || | | ||| || | | |||| || |
Sbjct 26720 CTCTGTGCTCTTCCTTGCCCGTGTTCTTTTTGAGGTCCAAGAACTC-AAAGATATCGGAA 26662
Query 146060 TGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTGGTCCACG 146116
||||| ||||| | || | ||| | || ||| ||| || |||||| || || ||
Sbjct 26661 TGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGTCGCTTGCCGCCACCTTGATCGACA 26602
Query 146117 TGACGTACCATGTTGTTAAAGACGCGCACCATGGGC 146152
| ||| ||| || ||||| || | | |||||||
Sbjct 26601 TAACGAGCCACATTATTAAACACTCTGAGCATGGGC 26566
>seq4710
Length=78879
Score = 129 bits (142), Expect = 6e-25
Identities = 166/228 (73%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGG-TCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||| |||| ||||||||| || || | || |||||||||| || |||||||| ||
Sbjct 8603 CCACCACGCAGACGCAGCACCAAGTGCAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGA 8662
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| ||||| ||||||||||| ||| |||| | ||||||||| || || ||
Sbjct 8663 CAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGG 8722
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||||||||| ||||| ||| || ||| | | ||| | ||||| | | ||| |
Sbjct 8723 GATTCCTTCCTTGTCTTGGATCTTAGCCTTCACATTCTCAATGGTATCAGATGGCTCCAC 8782
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || || || ||||| || |||||
Sbjct 8783 CTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTCACGAAGATTTGCAT 8830
>seq4983
Length=3163
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||| ||| ||||| || || | ||| |||||||| || |||||||| |||
Sbjct 643 GCCACCACGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGA 702
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || || || | |||||| || ||| |||| ||||||||||| || || ||
Sbjct 703 GAGGGTACGACCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 762
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| ||| || ||||| | ||| | ||||| | || ||| |
Sbjct 763 AATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAAC 822
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||||| ||| || || || | || ||||| || ||||||||
Sbjct 823 CTCCAAGGTAATGGTCTTGCCAGTCAATGTCTTTACAAAGATCTGCAT 870
>SEQ10860
Length=7223
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | || ||||| || || | || ||||| ||||| || |||||||||
Sbjct 1454 CCACCGCGAAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAA 1513
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || | |||||||| || |||| |||||||| || || |||||
Sbjct 1514 AGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGA 1573
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|||||||||||||| ||| | | || |||| | || | ||||| | | ||||
Sbjct 1574 ATTCCTTCTTTGTC-CTGAATCTTGGCTTTGACATTTTCAATGGTATCCGACGGTTCGAC 1632
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| ||||| || || ||||| ||||| || |||||
Sbjct 1633 CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCAT 1680
>seq2624
Length=22741
Score = 91.5 bits (100), Expect = 1e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 51808 ATGTTGCCGAGATCGCCCACGTGTCGCTCGGCGGAGTTGGGTGCGCCGTGGTGTTTGCCA 51867
||||| || | |||||||| || |||||| | ||||||| || || |||||
Sbjct 4332 ATGTTTCCCAAATCGCCCAGATGACGCTCGTTGTCTGTGGGTGCACCATGCTGTTTCTTG 4391
Query 51868 AGGGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGCCGAACTCGTGC 51927
||||||||||||| | |||||||| ||||| || | ||| |||||| ||||| |||
Sbjct 4392 TGGGGATTAAAGTGTGCTCCGGCGGATGTGCAGCCACTTGTGGAGTCGCCAAACTCATGC 4451
Query 51928 ACGTGAAAGCCGTGCAGTCC 51947
|| |||||||| || || ||
Sbjct 4452 ACATGAAAGCCATGTAGACC 4471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471740773123200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |