Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_008196.1 Length=56852 Score E Sequences producing significant alignments: (Bits) Value SEQ19605 113 2e-20 >SEQ19605 Length=8275 Score = 113 bits (124), Expect = 2e-20 Identities = 143/191 (75%), Gaps = 12/191 (6%) Strand=Plus/Plus Query 49346 CACGACCGGGACGTGAACGCCGCGAAGAACATCCTCGTCGCCGCCGGGCTGGCGGAGACG 49405 || ||||||||||| |||||||| | ||||||| ||||||| ||||| ||||||| | Sbjct 1722 CATGACCGGGACGTCAACGCCGCCAGAAACATCC---TCGCCGCGGGGCTCGCGGAGAGG 1778 Query 49406 CAAAACGCCTGCGGAGCGGATGCAAGACC-GGTGA--GGGCAAC----CTCCCGGCGATC 49458 ||||||||| ||||| || |||||| ||||| ||| | | | || |||| || Sbjct 1779 TGAAACGCCTGTGGAGCTGACAGAAGACCAGGTGACCGGGAATCCGGACACCAGGCGGTC 1838 Query 49459 TGCTGTGAAACAGGAAACCCTGGACGTGAGTCCGGGAATCCCCTGCCTTTAAGGCATGGG 49518 || ||| |||||| ||| || |||| |||||||||||| |||| | ||| ||| Sbjct 1839 GGCGTCGAAGCAGGAAGCCCCGGCTGTGAAGCCGGGAATCCCC-GCCTGTGAGG-GCGGG 1896 Query 49519 GAGGAAGTCAA 49529 ||||| ||||| Sbjct 1897 GAGGAGGTCAA 1907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181705262440140