Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_008205.1 Length=56692 Score E Sequences producing significant alignments: (Bits) Value seq6253 224 4e-54 >seq6253 Length=4700 Score = 224 bits (248), Expect = 4e-54 Identities = 396/573 (69%), Gaps = 8/573 (1%) Strand=Plus/Minus Query 42963 CTGACCCTTTTGGACATGTTCTGCGGGGCTGGCGGATCCAGCACCGGTGCCGTCCAGGTC 43022 || ||||| | ||| | |||||||| || ||||||||| |||||| || || | ||| Sbjct 4473 CTCACCCTCTCCGACTTCTTCTGCGGTGCCGGCGGATCCTCCACCGGAGCACTCGACGTC 4414 Query 43023 CCCGGAATCGAAGTCCGGGTGGCGGCCAACCACTGGAAGCTGGCGGTGGAGACGCACGGG 43082 ||||| |||| ||||| | || |||| ||||||| | || || || || || ||| | Sbjct 4413 CCCGGCGTCGACGTCCGCGCCGCCGCCACCCACTGGGATCTCGCCGTCGAAACCCACCAG 4354 Query 43083 GCGAACCATCCA-ACGACGGACCACATTTGCGCGGACCTGTCGCAGATCGACCCCCGACT 43141 |||| || ||| || || |||| ||||| ||| | ||| ||| || | | Sbjct 4353 CGCCACCACCCGGACGCCGAAC-ACATCTGCGCCGACATCAGCCAGTACGAGCCGAGCTT 4295 Query 43142 GTTCCCCAACACGGACATCCTGTGGGCATCCCCGTCGTGCACCAAACACTCCATCGCCCA 43201 ||||||| |||||||| || ||| ||||| || ||||||| ||| | | || || Sbjct 4294 GTTCCCCCACACGGACCTCGCCTGGTTCTCCCCCTCCTGCACCAGCCACACGGTGGCGCA 4235 Query 43202 AGGGTTGAAACGTCTCGACAAACAACCCG---ACCTGTTCGGAGAAACCC---TCCCCGA 43255 || || ||| |||| ||| || | |||||||||||| ||||||| Sbjct 4234 GGGCATGGCCCGTGCCGACCGGGCCGCCGCCTACGTCCTCGGAGAAACCCCCCTCCCCGA 4175 Query 43256 CGCGGCAGCCGAACGGTCCAGAGCCACCATGTGGGACGTCGTCCGGTTCTCCGAATACCA 43315 || || |||||| ||| | ||||||||||||||||| || || ||| |||| ||||| Sbjct 4174 CGACGCGCACGAACGATCCCGCGCCACCATGTGGGACGTGGTGCGCTTCACCGAGTACCA 4115 Query 43316 CCACTACCAAGCAGTGATCGTCGAAAACGTCGTCGACGTCTACCACTGGCCACCATTCCA 43375 ||||||| || || || ||||| |||||| ||| ||| | | ||| | ||||||| Sbjct 4114 CCACTACGCCGCGGTCATTGTCGAGAACGTCACCGAGGTCACCAAGTGGGCGCCATTCCC 4055 Query 43376 AGCGTGGCTGGCAGCGATGGACTCCATCGGCTACGCCCACCACATCGTGTACCTGAACTC 43435 |||||| | |||||||| | |||||||| |||| ||| || || ||| Sbjct 4054 CGCGTGGATCATGGCGATGGAAGCGCTCGGCTACAAGCACCGCATTGTCATGCTCAACAG 3995 Query 43436 GATGCACGCCCAAGTGTTCGGACCTGGTGCCCCGCAGTCACGTGACCGCATCTACATCGT 43495 ||||||||| ||| ||| || | ||| |||| || || ||||| ||||| ||| Sbjct 3994 CATGCACGCCGGCCTGTACGGCCCCGCCGCCGCGCAATCCCGCGACCGGTTCTACTGCGT 3935 Query 43496 GTTCTGGAGGCAGGGAAACACCGCCCCAGACCT 43528 ||||||| || | | ||||| ||| || || Sbjct 3934 GTTCTGGCAGCCCGACATCACCGACCCGGATCT 3902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181193542758540