Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_008205.1
Length=56692
Score E
Sequences producing significant alignments: (Bits) Value
seq6253 224 4e-54
>seq6253
Length=4700
Score = 224 bits (248), Expect = 4e-54
Identities = 396/573 (69%), Gaps = 8/573 (1%)
Strand=Plus/Minus
Query 42963 CTGACCCTTTTGGACATGTTCTGCGGGGCTGGCGGATCCAGCACCGGTGCCGTCCAGGTC 43022
|| ||||| | ||| | |||||||| || ||||||||| |||||| || || | |||
Sbjct 4473 CTCACCCTCTCCGACTTCTTCTGCGGTGCCGGCGGATCCTCCACCGGAGCACTCGACGTC 4414
Query 43023 CCCGGAATCGAAGTCCGGGTGGCGGCCAACCACTGGAAGCTGGCGGTGGAGACGCACGGG 43082
||||| |||| ||||| | || |||| ||||||| | || || || || || ||| |
Sbjct 4413 CCCGGCGTCGACGTCCGCGCCGCCGCCACCCACTGGGATCTCGCCGTCGAAACCCACCAG 4354
Query 43083 GCGAACCATCCA-ACGACGGACCACATTTGCGCGGACCTGTCGCAGATCGACCCCCGACT 43141
|||| || ||| || || |||| ||||| ||| | ||| ||| || | |
Sbjct 4353 CGCCACCACCCGGACGCCGAAC-ACATCTGCGCCGACATCAGCCAGTACGAGCCGAGCTT 4295
Query 43142 GTTCCCCAACACGGACATCCTGTGGGCATCCCCGTCGTGCACCAAACACTCCATCGCCCA 43201
||||||| |||||||| || ||| ||||| || ||||||| ||| | | || ||
Sbjct 4294 GTTCCCCCACACGGACCTCGCCTGGTTCTCCCCCTCCTGCACCAGCCACACGGTGGCGCA 4235
Query 43202 AGGGTTGAAACGTCTCGACAAACAACCCG---ACCTGTTCGGAGAAACCC---TCCCCGA 43255
|| || ||| |||| ||| || | |||||||||||| |||||||
Sbjct 4234 GGGCATGGCCCGTGCCGACCGGGCCGCCGCCTACGTCCTCGGAGAAACCCCCCTCCCCGA 4175
Query 43256 CGCGGCAGCCGAACGGTCCAGAGCCACCATGTGGGACGTCGTCCGGTTCTCCGAATACCA 43315
|| || |||||| ||| | ||||||||||||||||| || || ||| |||| |||||
Sbjct 4174 CGACGCGCACGAACGATCCCGCGCCACCATGTGGGACGTGGTGCGCTTCACCGAGTACCA 4115
Query 43316 CCACTACCAAGCAGTGATCGTCGAAAACGTCGTCGACGTCTACCACTGGCCACCATTCCA 43375
||||||| || || || ||||| |||||| ||| ||| | | ||| | |||||||
Sbjct 4114 CCACTACGCCGCGGTCATTGTCGAGAACGTCACCGAGGTCACCAAGTGGGCGCCATTCCC 4055
Query 43376 AGCGTGGCTGGCAGCGATGGACTCCATCGGCTACGCCCACCACATCGTGTACCTGAACTC 43435
|||||| | |||||||| | |||||||| |||| ||| || || |||
Sbjct 4054 CGCGTGGATCATGGCGATGGAAGCGCTCGGCTACAAGCACCGCATTGTCATGCTCAACAG 3995
Query 43436 GATGCACGCCCAAGTGTTCGGACCTGGTGCCCCGCAGTCACGTGACCGCATCTACATCGT 43495
||||||||| ||| ||| || | ||| |||| || || ||||| ||||| |||
Sbjct 3994 CATGCACGCCGGCCTGTACGGCCCCGCCGCCGCGCAATCCCGCGACCGGTTCTACTGCGT 3935
Query 43496 GTTCTGGAGGCAGGGAAACACCGCCCCAGACCT 43528
||||||| || | | ||||| ||| || ||
Sbjct 3934 GTTCTGGCAGCCCGACATCACCGACCCGGATCT 3902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181193542758540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |