Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_008206.2
Length=78296
Score E
Sequences producing significant alignments: (Bits) Value
SEQ32968 129 3e-25
SEQ22413 91.5 7e-14
>SEQ32968
Length=2597
Score = 129 bits (142), Expect = 3e-25
Identities = 230/330 (70%), Gaps = 8/330 (2%)
Strand=Plus/Minus
Query 49005 ACTGTCGTCGGTAATCTGACCGCCGACCCCGAGCTGCGATTCACCCCGAGTGGCGCGGCT 49064
||||||||||| || || || ||| || || | | ||| || |||||||||||
Sbjct 2176 ACTGTCGTCGGCAACCTCGTTGCTGACGTTGACCTTAGGTACACGCCCAGTGGCGCGGCG 2117
Query 49065 GTCGCAAACTTCACGGTCGTGTCCAATGACCGT---TTC--CTCAAGGATGGGG-AGTGG 49118
||||| |||||| |||| ||| | |||| ||| ||| | | | |||||
Sbjct 2116 GTCGCGAACTTCCGCGTCGCGTCAACGCCCCGTCGGTTCGACTCGAAGTCGAACCAGTGG 2057
Query 49119 CAGGATAAGGACCCCGTGTTCCTCCGCTGCAACGTGTGGCGTGAGTACGCTGAGAACGTC 49178
|| ||| | |||||||| |||||||||| ||||| || ||| |||||||||
Sbjct 2056 GTCGACGGGGAGGCACTGTTCCTCAGCTGCAACGTCTGGCGCCAGGCCGCCGAGAACGTC 1997
Query 49179 GCTGAGTCGCTG-ACACGCGGCACCACCGTGATCGTCACCGGCAAGCTCTCGCAGCGGAA 49237
|| | || ||| ||| | || ||| | ||||||||| ||||| ||| ||||||
Sbjct 1996 GCGAACTCCCTGCACAAGGGGGACCGC-GTGATCGTCTCCGGCCGGCTGCGCCAGCGGTC 1938
Query 49238 CTTCGAGGACCGCGAGGGGAACAAGCGCACCGTCGTGGAGCTGGAGGTCGATGAGATCGG 49297
|| ||| ||| ||||| | ||||||||||| | ||| |||||||||| ||| ||||
Sbjct 1937 CTACGAAACCCGTGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGGTCGACGAGGTCGG 1878
Query 49298 ACCCGCTCTGCGTTTCGCCACGGCGAAGGT 49327
|| |||| || | |||||| || ||||
Sbjct 1877 CCCGTCTCTCCGGTACGCCACCGCACAGGT 1848
>SEQ22413
Length=7522
Score = 91.5 bits (100), Expect = 7e-14
Identities = 220/326 (67%), Gaps = 8/326 (2%)
Strand=Plus/Minus
Query 49009 TCGTCGGTAATCTGACCGCCGACCCCGAGCTGCGATTCACCCCGAGTGGCGCGGCTGTCG 49068
||||||| || || || ||||||||| |||| | |||||| || || || || |||
Sbjct 3674 TCGTCGGCAACCTCGTGGCGGACCCCGAGTTGCGCTACACCCCCAGCGGTGCCGCGGTCA 3615
Query 49069 CAAACTTCACGGTCGTGTCCA-ATGAC--CGTTTC--CTCAAGGATGGGG-AGTGGCAGG 49122
| |||||| ||| | |||| | | || ||| |||| || ||||| |
Sbjct 3614 CCAACTTCCGGGTGGCTTCCACACCGCGACGCTTCGACTCACAGACCAACCAGTGGGTCG 3555
Query 49123 ATAAGGACCCCGTGTTCCTCCGCTGCAACGTGTGGCGTGAGTACGCTGAGAACGTCGCTG 49182
| | || || ||||||| ||||||| | ||||| ||| |||||||||||
Sbjct 3554 ACGACGAGGCCTTGTTCCTGACCTGCAACATCTGGCGCACCGCCGCCGAGAACGTCGCCA 3495
Query 49183 AGTCGCTG-ACACGCGGCACCACCGTGATCGTCACCGGCAAGCTCTCGCAGCGGAACTTC 49241
| ||| ||| | | ||| ||||||||||||||| | | || ||| || |
Sbjct 3494 ACAGCCTGCACAAGGGCGACCGG-GTGATCGTCACCGGCCGGTTGCGTCAACGGTCCTAC 3436
Query 49242 GAGGACCGCGAGGGGAACAAGCGCACCGTCGTGGAGCTGGAGGTCGATGAGATCGGACCC 49301
||| ||||||||| | ||||||||||| | ||| ||||| ||| ||| |||| |||
Sbjct 3435 GAGACCCGCGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGACCGACGAGGTCGGCCCC 3376
Query 49302 GCTCTGCGTTTCGCCACGGCGAAGGT 49327
| ||||| | |||||| || ||||
Sbjct 3375 TCGCTGCGCTACGCCACCGCCCAGGT 3350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 250281686479585
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |