Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2872 316 2e-81
seq9366 109 6e-19
>seq2872
Length=9359
Score = 316 bits (350), Expect = 2e-81
Identities = 613/894 (69%), Gaps = 23/894 (3%)
Strand=Plus/Plus
Query 92742 TTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACA 92801
||| ||||| ||||||| |||||| |||||||| | ||||| || |||| || ||
Sbjct 2929 TTAAAAATCCGCATCTAATGTAAACACATTGTCCAAACGATTCG-ATG--TAACTCC-CA 2984
Query 92802 TTTT-TGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCG 92860
| || ||||| || ||||| || || ||||| || || || || |||||||| |||
Sbjct 2985 TGCGCTGATATTCACCCACTTTCTTCTCGAAGAAGTTGGTTTTGCCATCCAAAGAGATCA 3044
Query 92861 AATTCACTA--GTGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACA 92918
| || | | || ||||||||| | ||| ||| ||| | | | ||| ||
Sbjct 3045 TCTCCATGAACGAGAATGGATTCTTTGTGTTGTAAATCTTGCCCACTCCAAGCTCAACCA 3104
Query 92919 ATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG-A 92977
||| | |||||| ||||| || || || | ||||||| | |||| ||||| || | |
Sbjct 3105 ATAGGCGATCAGCGACAAACTCGATATATTCGGACATCAGAGCACAGTTCATGCCAATCA 3164
Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037
|| | || || || || ||||| | ||| || | ||| || || || || | | |
Sbjct 3165 AGTTG-ACGGGCAGCGCATCGGTGAGGAACTCCTGCTCAATAGTCACAGCATCCGTTATG 3223
Query 93038 ATTTCTATTA------CTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAG 93091
||||| || | | | |||| || || || | || | | |||| |||
Sbjct 3224 ATTTCAATGATGCGTTCCCGACTA------GGCCGCTGCACCAAATGTTGGAACAT-AAG 3276
Query 93092 CAC-GCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| |||||||| ||| | |||||| || || || ||||| || ||| |||||| |
Sbjct 3277 CACCGCAAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAATGTAAG 3336
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
|| || | ||||| || ||||| ||||| || || || ||||| || ||| || ||
Sbjct 3337 TCCAGGCATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGCAAAGCTCCCACTGAAGAA 3396
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
|| ||||| || || ||||| || | ||||||||| |||| || || | ||
Sbjct 3397 GATGCCTTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTGGCAGCCTTCGAAGA 3456
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330
|||||| | |||||| || || || ||||| | || | ||||| || || ||
Sbjct 3457 GATCCAAGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATCGTTTCAATGGCATT 3516
Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390
|| || || ||||||| | | ||| | || || || || || | || | |||||
Sbjct 3517 GAAGAGATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACACTGTACAT 3576
Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450
||| ||||| ||||||||||| ||||| ||||| || || || || | || || || |
Sbjct 3577 TTCGGAATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCGGTCAC 3636
Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510
|||||||||||| ||| | || || |||||||| || || || ||||| || || ||
Sbjct 3637 CTGCACTTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCAGAAGCAGC 3696
Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570
||| || ||||| | |||| ||| ||||| ||||| ||| ||||||| |||||||
Sbjct 3697 AAAGAAGGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTGGCCCAATC 3756
Query 93571 GGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
| | || || || ||||| ||||||||||| ||||| ||||||||||| ||
Sbjct 3757 AGTCATGTCCTTGGACAGATCCACTTCTTCGACGGTCCAGAACGATGCTTCAGC 3810
>seq9366
Length=1054
Score = 109 bits (120), Expect = 6e-19
Identities = 77/87 (89%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||| ||||||||| |||||||||||||||||||||| |||||||| | | ||||
Sbjct 873 AGTCAGATTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAGAGAGAGC 932
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||| ||||||||
Sbjct 933 GTGGGTTCGAACCCCACATCTGACAAA 959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556539874160200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |