Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq61 230 2e-55 SEQ10860 143 2e-29 seq4983 105 6e-18 seq4710 96.9 3e-15 >seq61 Length=55249 Score = 230 bits (254), Expect = 2e-55 Identities = 711/1093 (65%), Gaps = 9/1093 (1%) Strand=Plus/Minus Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838 |||| || || |||| |||||| | || || ||||| ||||||| ||| ||||| ||| Sbjct 28008 TTGTTGACTGTGAATTGAATAGCATTGGCAGCTGGCTTTGTGCGCAGATAATACATTCCT 27949 Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898 || || | || ||||| | | | ||||| | || ||| ||||| ||||| Sbjct 27948 GTCTTGAGGCCTGCCTTCCACGAGAAGAAATGAATGGATGTTAACTTGCCGTAGTTGGGT 27889 Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCC 128958 | | ||| || ||||||||||| || |||||||| | |||||||| || ||| Sbjct 27888 TCGGCAACGTGAATGTTGAATGATTGACTCTGGTCAATAAAAGCACCGCGATCAGCTGCC 27829 Query 128959 ATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGT 129018 || || ||||| |||||||| || ||||||||||| || | || | Sbjct 27828 ATCTTGATGGTTGACTTCACCGAGATTTCCCAGACGGTTTTGTAAAGATCCCGTACTTCC 27769 Query 129019 TTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCATC 129078 | || || ||| ||||| || | | ||| | ||||| |||| || ||| Sbjct 27768 TGAGGAATGGATTCGATGTTTTGTATGGAGCCACGACTGGCAATGATTTGATTCTTCATG 27709 Query 129079 TGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTACTTGA 129138 | || | | |||| |||| | | ||||| ||| | | |||| || | Sbjct 27708 TCATCATCCCATAAATCTAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATTG 27649 Query 129139 AAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGATTCA 129198 || || || | ||||||||||| ||||||||| || |||||||||| || ||| Sbjct 27648 AACTCTCCGGACAAAACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTCA 27589 Query 129199 TTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCGAGTTT 129258 || || || | || || || || | || |||||||| ||| || ||||||||| Sbjct 27588 TTATTACCCATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCTACAAGCAGCGAGTTT 27529 Query 129259 CGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGATGTGGGT 129318 | | || |||| ||| || | ||||| ||||| ||||| | ||||||| Sbjct 27528 CTAACGCCATGCTCTTTGATTTTCAATTTTAGAGCAGTCCAATCCCAAAGGCTTGTGGGT 27469 Query 129319 GTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAGTAGGAA 129378 || | | ||||| ||||| |||| || ||| || | |||| | ||||| Sbjct 27468 GTCTTGTCCCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCAGCGTAGGTT 27409 Query 129379 TCGTGCACGCCGTAAGCTTTT--GCCAATTCGCAACTCGCTTCCAATGCGCCAAAATAAA 129436 || | |||| ||||| |||| || ||||| || || | || ||| | || | Sbjct 27408 TCATAGGGACCGT--CCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCATAGTAGA 27351 Query 129437 TTGTTTCGGCAATTTTGGTG-TTCAACACTTTGGCCTGGTCGCTTTCGTACGGCATACGC 129495 | ||||| | | | || || || | || | ||| | ||| || || || || | |||| Sbjct 27350 TGGTTTC-GAAGATCTGCTGATTGAGCAATACGGCTTTGTCACTCTCATAGGGAAAACGC 27292 Query 129496 AACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTTCTA 129555 | || || | |||||| || || |||| || | || ||||| |||||| || | Sbjct 27291 ATCAGAATTAAGGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATGTCTTAAA 27232 Query 129556 TTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAAATTC 129615 |||||||| | |||| || |||||||| ||||| || || |||||||| ||||| Sbjct 27231 TTGGATTTCTTTGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTTCAAATTT 27172 Query 129616 TTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTACATCGATG 129675 || ||| |||| || || | || | | | |||| | | | | | || | Sbjct 27171 CTGGTGACAGTTTTAGTAACTTCCTTCAGTTTCTTGAAATCGAA--TGTTTTCTCTGAAG 27114 Query 129676 TCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCA 129735 || ||||| ||| | ||||| |||||||||||||||||| | || | | Sbjct 27113 TC-ACAAACATATTCAAGGCTATCGATGCCAAATTGCAGACGGCAATCTCATCGGGTGCC 27055 Query 129736 CTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGA 129795 || || |||||||| | ||| | || || ||| |||||||| | || || ||| Sbjct 27054 GAATATTCAACAATTTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGA 26995 Query 129796 TTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGC 129855 || || ||| ||||||||| || ||| | | ||||||||| ||||| || || ||||| Sbjct 26994 TTGCTCTTCCTGTTGCAAGAGTCCTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGA 26935 Query 129856 GTTTCGACAATGG 129868 | ||| ||||||| Sbjct 26934 GATTCAACAATGG 26922 >SEQ10860 Length=7223 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||||||| || |||||||| | || ||||| || |||||||||| || ||| | | Sbjct 1681 GATGCAAATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTC 1622 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||||| | || || ||||| || ||||| ||||| || || ||||| || ||||| Sbjct 1621 GGATACCATTGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCA 1562 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| ||| | || ||||||||||| || || || ||| ||||| | ||||||||||| Sbjct 1561 ACAGCGTTTGATCTTTGCCGGCAAGCAATTGGAAGATGGGCGCACTCTTTCCGATTACAA 1502 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || |||||||| || || | || || || | || | ||||| ||| Sbjct 1501 TATCCAAAAAGAGTCTACATTGCACTTGGTGCTCCGCCTTCGCGGTGGT 1453 >seq4983 Length=3163 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || ||||| || || || || || || || | || | || || || | Sbjct 874 AAATATGCAGATCTTTGTAAAGACATTGACTGGCAAGACCATTACCTTGGAGGTTGAGCC 815 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | | |||||| | || | |||| || || || ||||||||||||||||| || || Sbjct 814 CTCTGATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGA 755 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| || ||| | || || ||||| || ||||| || ||| || ||| ||||||| || Sbjct 754 TCAGCAGCGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGTACCCTCTCCGACTA 695 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| || || || || ||| | || || || | || |||| || || Sbjct 694 CAACATCCAGAAGGAGTCAACCCTTCACTTGGTGCTCCGTCTGCGTGGTGG 644 >seq4710 Length=78879 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/235 (69%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || |||||||| || || || || | || || || || |||| || || ||||| Sbjct 8836 GTCAAAATGCAAATCTTCGTGAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTGGAG 8777 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 | | |||||| | || || | || || || ||||||||||| || || || || Sbjct 8776 CCATCTGATACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAAGGAATCCCCCCA 8717 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 ||||| || ||||| || || || ||||| ||| | |||||| ||||| | || || Sbjct 8716 GATCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCAGAC 8657 Query 22393 TACAACATTCAAAAAGAATCCA-CCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || || || || | || | || || || |||| |||| || ||| Sbjct 8656 TACAACATCCAGAAGGAGTCGACCCTTGCACTTGGTGCTGCGTCTGCGTGGTGGT 8602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419492152869325