Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq61 230 2e-55
SEQ10860 143 2e-29
seq4983 105 6e-18
seq4710 96.9 3e-15
>seq61
Length=55249
Score = 230 bits (254), Expect = 2e-55
Identities = 711/1093 (65%), Gaps = 9/1093 (1%)
Strand=Plus/Minus
Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838
|||| || || |||| |||||| | || || ||||| ||||||| ||| ||||| |||
Sbjct 28008 TTGTTGACTGTGAATTGAATAGCATTGGCAGCTGGCTTTGTGCGCAGATAATACATTCCT 27949
Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898
|| || | || ||||| | | | ||||| | || ||| ||||| |||||
Sbjct 27948 GTCTTGAGGCCTGCCTTCCACGAGAAGAAATGAATGGATGTTAACTTGCCGTAGTTGGGT 27889
Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCC 128958
| | ||| || ||||||||||| || |||||||| | |||||||| || |||
Sbjct 27888 TCGGCAACGTGAATGTTGAATGATTGACTCTGGTCAATAAAAGCACCGCGATCAGCTGCC 27829
Query 128959 ATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGT 129018
|| || ||||| |||||||| || ||||||||||| || | || |
Sbjct 27828 ATCTTGATGGTTGACTTCACCGAGATTTCCCAGACGGTTTTGTAAAGATCCCGTACTTCC 27769
Query 129019 TTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCATC 129078
| || || ||| ||||| || | | ||| | ||||| |||| || |||
Sbjct 27768 TGAGGAATGGATTCGATGTTTTGTATGGAGCCACGACTGGCAATGATTTGATTCTTCATG 27709
Query 129079 TGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTACTTGA 129138
| || | | |||| |||| | | ||||| ||| | | |||| || |
Sbjct 27708 TCATCATCCCATAAATCTAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATTG 27649
Query 129139 AAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGATTCA 129198
|| || || | ||||||||||| ||||||||| || |||||||||| || |||
Sbjct 27648 AACTCTCCGGACAAAACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTCA 27589
Query 129199 TTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCGAGTTT 129258
|| || || | || || || || | || |||||||| ||| || |||||||||
Sbjct 27588 TTATTACCCATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCTACAAGCAGCGAGTTT 27529
Query 129259 CGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGATGTGGGT 129318
| | || |||| ||| || | ||||| ||||| ||||| | |||||||
Sbjct 27528 CTAACGCCATGCTCTTTGATTTTCAATTTTAGAGCAGTCCAATCCCAAAGGCTTGTGGGT 27469
Query 129319 GTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAGTAGGAA 129378
|| | | ||||| ||||| |||| || ||| || | |||| | |||||
Sbjct 27468 GTCTTGTCCCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCAGCGTAGGTT 27409
Query 129379 TCGTGCACGCCGTAAGCTTTT--GCCAATTCGCAACTCGCTTCCAATGCGCCAAAATAAA 129436
|| | |||| ||||| |||| || ||||| || || | || ||| | || |
Sbjct 27408 TCATAGGGACCGT--CCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCATAGTAGA 27351
Query 129437 TTGTTTCGGCAATTTTGGTG-TTCAACACTTTGGCCTGGTCGCTTTCGTACGGCATACGC 129495
| ||||| | | | || || || | || | ||| | ||| || || || || | ||||
Sbjct 27350 TGGTTTC-GAAGATCTGCTGATTGAGCAATACGGCTTTGTCACTCTCATAGGGAAAACGC 27292
Query 129496 AACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTTCTA 129555
| || || | |||||| || || |||| || | || ||||| |||||| || |
Sbjct 27291 ATCAGAATTAAGGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATGTCTTAAA 27232
Query 129556 TTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAAATTC 129615
|||||||| | |||| || |||||||| ||||| || || |||||||| |||||
Sbjct 27231 TTGGATTTCTTTGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTTCAAATTT 27172
Query 129616 TTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTACATCGATG 129675
|| ||| |||| || || | || | | | |||| | | | | | || |
Sbjct 27171 CTGGTGACAGTTTTAGTAACTTCCTTCAGTTTCTTGAAATCGAA--TGTTTTCTCTGAAG 27114
Query 129676 TCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCA 129735
|| ||||| ||| | ||||| |||||||||||||||||| | || | |
Sbjct 27113 TC-ACAAACATATTCAAGGCTATCGATGCCAAATTGCAGACGGCAATCTCATCGGGTGCC 27055
Query 129736 CTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGA 129795
|| || |||||||| | ||| | || || ||| |||||||| | || || |||
Sbjct 27054 GAATATTCAACAATTTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGA 26995
Query 129796 TTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGC 129855
|| || ||| ||||||||| || ||| | | ||||||||| ||||| || || |||||
Sbjct 26994 TTGCTCTTCCTGTTGCAAGAGTCCTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGA 26935
Query 129856 GTTTCGACAATGG 129868
| ||| |||||||
Sbjct 26934 GATTCAACAATGG 26922
>SEQ10860
Length=7223
Score = 143 bits (158), Expect = 2e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||| || |||||||| | || ||||| || |||||||||| || ||| | |
Sbjct 1681 GATGCAAATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTC 1622
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|||||| | || || ||||| || ||||| ||||| || || ||||| || |||||
Sbjct 1621 GGATACCATTGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCA 1562
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||| ||| | || ||||||||||| || || || ||| ||||| | |||||||||||
Sbjct 1561 ACAGCGTTTGATCTTTGCCGGCAAGCAATTGGAAGATGGGCGCACTCTTTCCGATTACAA 1502
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| |||||||| || || | || || || | || | ||||| |||
Sbjct 1501 TATCCAAAAAGAGTCTACATTGCACTTGGTGCTCCGCCTTCGCGGTGGT 1453
>seq4983
Length=3163
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| || ||||| || || || || || || || | || | || || || |
Sbjct 874 AAATATGCAGATCTTTGTAAAGACATTGACTGGCAAGACCATTACCTTGGAGGTTGAGCC 815
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| | |||||| | || | |||| || || || ||||||||||||||||| || ||
Sbjct 814 CTCTGATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGA 755
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||| || ||| | || || ||||| || ||||| || ||| || ||| ||||||| ||
Sbjct 754 TCAGCAGCGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGTACCCTCTCCGACTA 695
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||| || || || || ||| | || || || | || |||| || ||
Sbjct 694 CAACATCCAGAAGGAGTCAACCCTTCACTTGGTGCTCCGTCTGCGTGGTGG 644
>seq4710
Length=78879
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/235 (69%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| || |||||||| || || || || | || || || || |||| || || |||||
Sbjct 8836 GTCAAAATGCAAATCTTCGTGAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTGGAG 8777
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
| | |||||| | || || | || || || ||||||||||| || || || ||
Sbjct 8776 CCATCTGATACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAAGGAATCCCCCCA 8717
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
||||| || ||||| || || || ||||| ||| | |||||| ||||| | || ||
Sbjct 8716 GATCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCAGAC 8657
Query 22393 TACAACATTCAAAAAGAATCCA-CCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || || || || | || | || || || |||| |||| || |||
Sbjct 8656 TACAACATCCAGAAGGAGTCGACCCTTGCACTTGGTGCTGCGTCTGCGTGGTGGT 8602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419492152869325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |