Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq3106 96.9 7e-15
SEQ21224 89.7 1e-12
SEQ15859 89.7 1e-12
seq2155 89.7 1e-12
seq2000 84.2 4e-11
>seq3106
Length=12966
Score = 96.9 bits (106), Expect = 7e-15
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 142049 GCATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTC 142108
||||||| || ||||||| ||| ||||||||||||||||||||||||||| ||||||||
Sbjct 12074 GCATGTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTC 12133
Query 142109 GACCCCCGCCAGAGACGC 142126
|| |||||| || || ||
Sbjct 12134 GATCCCCGCAAGGGATGC 12151
>SEQ21224
Length=3550
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1228 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1169
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 1168 CCCACGTTGGGC 1157
>SEQ15859
Length=8708
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 4872 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4813
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 4812 CCCACGTTGGGC 4801
>seq2155
Length=10711
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
|||| || ||||||| ||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 5918 TGTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGAT 5977
Query 142112 CCCCGCCAGAGA 142123
|||||| || ||
Sbjct 5978 CCCCGCAAGGGA 5989
>seq2000
Length=3494
Score = 84.2 bits (92), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 142057 CTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116
|| ||||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 3140 CTTTGGCGCAGCGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGATCCCCG 3081
Query 142117 CCAG 142120
| ||
Sbjct 3080 CAAG 3077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027229635924305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |