Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq2872 183 6e-41
seq61 131 3e-25
>seq2872
Length=9359
Score = 183 bits (202), Expect = 6e-41
Identities = 478/718 (67%), Gaps = 31/718 (4%)
Strand=Plus/Minus
Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483
|||||||||| || || ||||| || || || || || || |||| | | || |
Sbjct 3707 TGGCCTTCTTTGCTGCTTCTGATGGAATTGTTAACGAAAATCTGGTCGAACGTTTTAGCC 3648
Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543
|||| |||||| ||||| || ||||| || ||||||||||| ||||| ||||| |
Sbjct 3647 AAGAAGTGCAGGTGACCGAGGCACGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATG 3588
Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC-CGTCGAG 42599
|||| || || |||| || |||||| |||| || ||| |||||| | || ||
Sbjct 3587 TGCATTCCGAAATGTA---CAGTGTGCTCATTGACACCTATATCAGGGATCCTCATC-AG 3532
Query 42600 CGTAACGGGCTGTTCAAGGCCATGGAGACGATGCC--CTGCATCAAGAAGAAGGCGGACT 42657
|| || || ||||| ||||| || |||||||| ||| | ||| |||||| ||||
Sbjct 3531 CGAGACTATCTCTTCAATGCCATTGAAACGATGCCGGCTG--TTAAGCGGAAGGCAGACT 3474
Query 42658 GGGCGCTCAACTGGATCGAGAGTC-CCGACG-----CAACGTTCGGCGAGAGGCTGGTAG 42711
|||| || |||||| || ||| | |||| || || || | | | |
Sbjct 3473 GGGCTCTTTCTTGGATC-----TCTTCGAAGGCTGCCAAC-TTTGGTGAACGTATTATTG 3420
Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771
| ||| | || || || |||||||||||| || ||| || |||||||||||||| |
Sbjct 3419 CTTTTGCTGCTGTTGAAGGCATCTTCTTCAGTGGGAGCTTTGCATCCATCTTCTGGCTGA 3360
Query 42772 AGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
|| || | ||||| ||||| || ||||| |||||| | ||| | || || |
Sbjct 3359 AGAAGCGTGGACTTATGCCTGGACTTACATTCTCCAACGAATTGATCTCTCGCGATGAAG 3300
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA-AGCCCTCG 42890
| |||||| | |||||||| || ||||| | || | || || | ||| |
Sbjct 3299 GTCTGCATTGTGACTTTGCGGTGCTTATGTTC-----CAACATTTGGTGCAGCGGCCTAG 3245
Query 42891 -AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949
||| || || | ||||| ||||| || ||| || ||| |||||||||||||
Sbjct 3244 TCGGGAACGCATCATTGAAATCATAACGGATGCTGTGACTATTGAGCAGGAGTTCCTCAC 3185
Query 42950 GCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009
| |||||||||| | || | ||||||||| | || |||| | | || ||| |
Sbjct 3184 CGATGCGCTGCCCGTCAACTTGATTGGCATGAACTGTGCTCTGATGTCCGAATATATCGA 3125
Query 43010 GTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTG 43069
|| ||||| || | || || || | || | || | |||||||| |
Sbjct 3124 GTTTGTCGCTGATCGCCTATTGGTTGAGCTTGGAGTGGGCAAGATTTACAACACAAAGAA 3065
Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAG 43127
|| ||| || ||||||| ||||| ||||| ||||| |||||||| |||||||||
Sbjct 3064 TCCATTCTCGTTCATGGAGATGATCTCTTTGGATGGCAAAACCAACTTCTTCGAGAAG 3007
>seq61
Length=55249
Score = 131 bits (144), Expect = 3e-25
Identities = 565/883 (64%), Gaps = 33/883 (4%)
Strand=Plus/Minus
Query 244299 CCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGG 244358
||||||| || ||||||| | |||||||| || || | || ||||||| ||||
Sbjct 27461 CCCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCAGCGTAGGTTTCATAGG 27402
Query 244359 GACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGA 244418
||||||| || ||||||| ||| || | || ||||| | ||||||||||| ||||
Sbjct 27401 GACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGA 27342
Query 244419 AGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGA 244478
||||| || || | ||| ||| | | |||| | | ||||| || |
Sbjct 27341 AGATCTGCTGATTGAGCAATACGGCTTTGTCACTCTCATAGGGAAAACGCATCAGAATTA 27282
Query 244479 AGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCA 244538
|| ||||||| | ||||| ||||| ||||| ||||| | |||| ||||| |
Sbjct 27281 AGGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCT 27222
Query 244539 TGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCA 244598
| || ||||||| || || | ||| || || | ||||| | || | ||||| ||
Sbjct 27221 TTGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTTCAAATTTCTGGTGA-CA 27163
Query 244599 ---TGCGGACGACGTCGGCCAGCAGCT-GAAAGTCGTACTCGTAGGGATCCTCGGCGATG 244654
| | | || || ||| || |||| ||| | | | ||| | | |
Sbjct 27162 GTTTTAGTA--ACTTCCTTCAGTTTCTTGAAA-------TCGAATGTTTTCTCTG--AAG 27114
Query 244655 GTGATCCTCACAAACTCGTTGAGGGCGA-CGCTGGCCAGGTTGCAGACGGCCACCTCCTC 244713
|||||||| || | ||| | || || ||| ||||||||||| | ||| ||
Sbjct 27113 -------TCACAAACATATTCAAGGCTATCGATG-CCAAATTGCAGACGGCAATCTCATC 27062
Query 244714 CGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTG 244773
| | || | ||||| || ||||||||||| ||||| ||||||||||| | |
Sbjct 27061 GGGTGCCGAATATTCAACAATTTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCAACATT 27002
Query 244774 CTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTC 244833
||| |||||| ||| |||||| | ||||||| |||||||| | || || |||||
Sbjct 27001 CTGCTGATTGCTCTTCCTGTTGCAAGAGTCCTTGAAGAGCATGTACGGAGTGCCAGTCTC 26942
Query 244834 GAGCTGGGCGACGAGGACGCTGTTCCAGAG-GTCCCTAGCCTTGACCGTCCTGCGA---G 244889
| || | | | | | | ||| || || | || || | || ||| |
Sbjct 26941 AACTTGAGATTCAACAATGGCATACCAAAGAGTTTGT-GCTTTAA---TCACACGATTTG 26886
Query 244890 CCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGT 244949
| ||||| |||||| || ||||| ||| || || ||||| || || |
Sbjct 26885 CGCGACCCTCGCTCTCGTACTTTGTATACAGCTTCTCAAAGTCATCCCCCCAAACGTCTT 26826
Query 244950 CTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCT 245009
| | |||||| ||| || |||| || ||| || | | ||| || | ||
Sbjct 26825 CCAAGCCGGGACACTTGTGAGGACACAACAGCGACCAATCCTCATTGGCCTCCACACGCT 26766
Query 245010 GCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCG 245069
||| || || ||||| ||||| | ||| | |||||| || | | || ||||| |||
Sbjct 26765 TCATAAACAGATCGGGTATCCACAAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTTCCT 26706
Query 245070 AGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGT 245129
||| |||||||| | || ||||| || ||||||| ||| ||||| || |||| ||
Sbjct 26705 TGCCCGTGTTCTTTTTGAGGTCCAAGAACTCAAAGATATCGGAATGCCAAGGTTCCAGGT 26646
Query 245130 AGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC 245172
| | || | ||||| || |||||| ||| || || || ||
Sbjct 26645 AAATGGCAAAAGCGCCTGGTCGCTTGCCGCCACCTTGATCGAC 26603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943794965514800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |