Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
SEQ17778 114 1e-20
seq354 104 2e-17
>SEQ17778
Length=11298
Score = 114 bits (126), Expect = 1e-20
Identities = 201/289 (70%), Gaps = 4/289 (1%)
Strand=Plus/Plus
Query 37842 TGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCATG 37901
|||||| |||| ||| | ||||| || ||||| || |||||| | | || | |||
Sbjct 3967 TGGAACTCGGCGCAATTGCAGCTGGTCAATGAGGGCAAAATGCATGGATTTCTGAGAATG 4026
Query 37902 TATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACC--GCGCTCAACTACG 37959
|||||| |||||| || | |||||| | || | | |||| | ||||| | ||
Sbjct 4027 TATTGGGCCAAGAAGATACTTGAATGGACAGAA-ACAC-CAGAGCAGGCGCTGGAGTATA 4084
Query 37960 CCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCT 38019
||| | || || || || ||||| |||| || || |||||||||||||| || ||||
Sbjct 4085 GCATATTGCTGAACGACAAATACAGTCTGGATGGCCGCGATCCCAACGGTTATGTGGGCT 4144
Query 38020 GTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATTCCCATTTACGGCA 38079
| |||||||| | | || | || |||| || ||| ||| | | || | |||||
Sbjct 4145 GCATGTGGTCTGTCGGGGGTATCCATGATAACGCATGGAAGGAGCGTGCTATATTCGGCA 4204
Query 38080 AGATTCGGTACATGAACTACAACGGATGTGTTAGGAAGTTTAATGTTAA 38128
||||||| || |||||||| | |||||| | || ||| |||||||
Sbjct 4205 AGATTCGCTATATGAACTATCAGGGATGTAAACGAAAATTTGATGTTAA 4253
>seq354
Length=2571
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 1684 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 1743
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422
| |||||||||| |||||| || | ||| ||
Sbjct 1744 ATAACTGATATAATGAGCCTTTTGCGGTTTC 1774
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 1684 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 1743
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619
| |||||||||| |||||| || | ||| ||
Sbjct 1744 ATAACTGATATAATGAGCCTTTTGCGGTTTC 1774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396839288776210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |