Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
SEQ10860 140 8e-28
seq4710 111 4e-19
>SEQ10860
Length=7223
Score = 140 bits (154), Expect = 8e-28
Identities = 148/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|||||||||||||| || |||| || ||||| || ||||| ||||| || || || |||
Sbjct 1490 TCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAG 1549
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| ||||||||| |||| || ||||||||||| ||||| || || ||||| ||
Sbjct 1550 ATCAAACGCTGTTG---ATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACA 1606
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
||||| || | ||| || ||| || || || ||||| ||||| || || || || ||
Sbjct 1607 TTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTA 1666
Query 288460 ACGAATATCTGCAT 288473
||||| || |||||
Sbjct 1667 ACGAAGATTTGCAT 1680
>seq4710
Length=78879
Score = 111 bits (122), Expect = 4e-19
Identities = 144/198 (73%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | || ||||| || || || | || || || ||||||
Sbjct 8640 TCCTTCTGGATGTTGTAGTCTGACAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAG 8699
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| |||||||| ||| |||||| |||||||| || || ||||| || || |||||
Sbjct 8700 ATGAGACGCTGCTGA---TCTGGGGGGATTCCTTCCTTGTCTTGGATCTTAGCCTTCACA 8756
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || || ||||| ||||| || ||||| |||||
Sbjct 8757 TTCTCAATGGTATCAGATGGCTCCACCTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTC 8816
Query 288460 ACGAATATCTGCATTATG 288477
||||| || |||||| ||
Sbjct 8817 ACGAAGATTTGCATTTTG 8834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178957554184190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |