Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_009993.2 Length=53746 Score E Sequences producing significant alignments: (Bits) Value seq1762 95.1 4e-15 SEQ29893 93.3 1e-14 >seq1762 Length=3526 Score = 95.1 bits (104), Expect = 4e-15 Identities = 173/251 (69%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 13334 GTTCTCCAAGATGGGCATCAACGGATCCGACGCCGGAACGATGCTCAAAACGTCGTTGCA 13393 |||| |||| ||||||| | || || ||||| || ||| ||||||| | | ||| Sbjct 1578 GTTCGCCAACGCGGGCATCCAGGGCTCTGACGCGGGCACGCTGCTCAAGTCCGCACTGCT 1637 Query 13394 GGCGATCACCGATCAGGGGAACCCGGCGCAGGCGGCCATCGAACAGTTGGGCCTCACCCT 13453 |||| | || || ||||| || || ||||||||||| || || | | ||||| | | Sbjct 1638 GGCGCTGACGGACCAGGGCAAGCCCGCGCAGGCGGCGATGGAGGAACTCGGCCTGTCGGT 1697 Query 13454 GTACGACAGCAACGGCAAATTCGTCGG-CTACACGAACATGATGAACCAGGTGGCCGAAG 13512 |||||||| | ||||| ||||| || |||| | || | | ||||| || || | Sbjct 1698 GTACGACATGCAGGGCAACTTCGTTGGACTACCGGCAC-TCTTCGACCAGCTGCAGGATG 1756 Query 13513 CGTCAACCCACATGACGCAGGAACAATTTCAAGCCGCGACGGCGGTGTTGTTCGGGTCGG 13572 || | | |||||||| ||| | ||| || || || || ||| | ||||| || | Sbjct 1757 CGCAGAAGCGCATGACGCCGGAGGCGTATCAGGCGGCCACCGCCGTGCTCTTCGGCTCTG 1816 Query 13573 ATGCCATGCGC 13583 | ||||||||| Sbjct 1817 ACGCCATGCGC 1827 >SEQ29893 Length=4967 Score = 93.3 bits (102), Expect = 1e-14 Identities = 132/182 (73%), Gaps = 18/182 (10%) Strand=Plus/Minus Query 15189 TGGGATGCCATCGCGCAGGCCGAATCCGGCGGCAACTGGGCGATCAACACCGGCAACGGG 15248 ||||| ||||||| ||| ||| ||| |||||||||||| ||||||||||||||||| Sbjct 2016 TGGGACACCATCGCCCAGTGCGAGTCCACCGGCAACTGGGCCATCAACACCGGCAACGGT 1957 Query 15249 TACTACGGCGGGTTGCAGTTCGACCAAC-CGACCTGGGACGCCTACAAACCGGCGGGCGC 15307 | | | ||||| | |||||| ||| || ||||||||| || || ||||| || Sbjct 1956 TTCAAGGGCGGCCTCCAGTTC-ACCGACTCGACCTGGGCCGGCT-----TCGGCG---GC 1906 Query 15308 ACCG-----GCCC---GGGCCGACATGGCCCCGCGGGAGACACAGATCGCCGCGGCGGAG 15359 |||| |||| | |||||| |||| | || ||| |||||||||| || ||| Sbjct 1905 ACCGAGTACGCCCCGAGCGCCGACCAGGCCACCCGTGAGCAGCAGATCGCCGTCGCCGAG 1846 Query 15360 AA 15361 || Sbjct 1845 AA 1844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171771504121080