Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_010106.1 Length=52975 Score E Sequences producing significant alignments: (Bits) Value SEQ46028 104 8e-18 >SEQ46028 Length=683 Score = 104 bits (114), Expect = 8e-18 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 52724 GATGGCTCTATGATTGGCTTAAACAAGCAAATTCTATGCGGATATGTGGAATATATCACG 52783 || |||| ||||||||| | ||||| | || || ||| ||||||||||| ||||| Sbjct 637 GACGGCTTTATGATTGGTCTGAACAAAGAGATCCTGTGCCAGTATGTGGAATACATCACC 578 Query 52784 AATATTCGTATGCAAGCAGTTGGATTAGATGCTCCATTC-AAAGGTGCAACTAACCCGAT 52842 ||||| || ||||| || || || | | | || ||| ||| || | |||||||| Sbjct 577 AATATCCGCATGCAGGCGGTCGGCCTTGGTCTGCCGTTCGAAACCCGC-TCCAACCCGAT 519 Query 52843 TCCGTGGATTAATGCATGGTTGAATTCGGATGCTGTACAGGTTGCTCCACAGGAAACGGA 52902 |||||||| ||||| |||||| || || || ||||| || || |||||| ||| Sbjct 518 CCCGTGGATCAATGCCTGGTTGGTGTCCGACAACGTGCAGGTAGCGCCGCAGGAAGTGGA 459 Query 52903 GATTAGTTCCTACCTGGTCGGGCAAATTGACTCCGA 52938 | || || |||||||| || || || ||||| || Sbjct 458 AGTGAGCTCTTACCTGGTTGGCCAGATCGACTCGGA 423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169305654905370