Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq61 147 2e-30 seq4710 118 1e-21 SEQ10860 111 2e-19 >seq61 Length=55249 Score = 147 bits (162), Expect = 2e-30 Identities = 552/851 (65%), Gaps = 21/851 (2%) Strand=Plus/Minus Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTG--TATTGCACAATTTCTGCGC 154644 || ||||| ||||| |||||||| || || | | | | |||| |||||||| | || Sbjct 27090 GATGCCAAATTGCAGACGGCAATCTCATCGGG--TGCCGAATATTCAACAATTTCAGTGC 27033 Query 154645 ACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGT 154704 | | || |||||| |||||||| | || | |||||| || ||||||| | || Sbjct 27032 AGAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGT 26973 Query 154705 CTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTG--TGCGAAA 154762 | ||| | | |||||||| ||||| || || ||||| | ||||| ||| | | | ||| Sbjct 26972 CCTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAA 26913 Query 154763 CAGACTTCGCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAG 154822 || || | || | || || | | ||| |||||||| || | | ||||| Sbjct 26912 GAG--TTTGTGCTTTAATCACACGATTTGCGCGACCCTCGCTCTCGTACTTTGTATACAG 26855 Query 154823 TTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAA 154882 || ||||| || | | ||||| ||| |||||||| || ||||||| || Sbjct 26854 CTTCTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAG 26795 Query 154883 TGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTA 154942 ||||| || || | || || |||||||||| ||| || | |||||| ||||| Sbjct 26794 CGACCAATCCTCATTGGCCTCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTA 26735 Query 154943 CAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATC 155002 || | |||||| || | | ||||| |||| |||| || | | ||| || || Sbjct 26734 GAAGAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTGTTCTTTTTGAGGTCCAAGAACTC 26675 Query 155003 ATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTTTCCTCC 155062 | | || |||| ||||| || || | || | ||| | |||||| || || || || Sbjct 26674 AAAGATATCGGAATGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGTCGCTTGCCGCC 26615 Query 155063 ---TTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCT 155119 |||||| || | ||| | |||||| |||| | | || || ||| || | Sbjct 26614 ACCTTGATCGACATAACGAGCCACATTATTAAACACTCTGAGCATGGGCACCAAACCATT 26555 Query 155120 GGCCGTGCCGTTGGTGCCACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAAC 155179 | ||||| || ||||||| |||| | |||| ||||| ||| ||||| | Sbjct 26554 TGAAGTGCCATTAGTGCCACAGATCGAGGTGCCCTTGGCACGAATACAATGCACATTGA- 26496 Query 155180 GCCCAAA-CCTCCGCCGTATTTAGATAT--TTGCGCACAGTCCGCCAAAGTTTCGTACAT 155236 |||||| || || || |||| || || |||| ||| | || | | || | | || Sbjct 26495 GCCCAATGCCACCAGCGGATTTGGAGATCATTGCACACTGCTCGACGGACTT--GAAAAT 26438 Query 155237 TCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGG 155296 |||| |||| || || || || | ||||||||| || | || || || Sbjct 26437 GCCTTCGATGGAATCGGAAACCATTGTTAAAAGGAAACACGATGACATCTGGGGACGATT 26378 Query 155297 GCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTA-AG- 155354 | | | || |||||||| || || || || ||||| || ||| || | | || Sbjct 26377 GGTGGCAGCAGCAAATAACGTTGGCGATGCATGCGTAAA-ATAGCGTTC-CGATAACAGA 26320 Query 155355 TTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATC 155414 |||||||| |||| |||| || ||||| || || || || |||||||| | |||| Sbjct 26319 TTGTAAGTCTCGACAGCGGAATCGATGTCTTCGCCATGGATTCCAATCGCCACTCTCATC 26260 Query 155415 AGCATGTGTTG 155425 |||||||| || Sbjct 26259 AGCATGTGCTG 26249 Score = 127 bits (140), Expect = 2e-24 Identities = 288/431 (67%), Gaps = 8/431 (2%) Strand=Plus/Minus Query 154075 ACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACG 154134 ||||||| || || || || || || | || || || |||| ||| |||||||| | Sbjct 27605 ACGGCTCAAAGGACTCATTATTACCCATGATCTGGGCAGTAGATGCCGTGGGCATTGGAG 27546 Query 154135 CCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAAT 154194 | || | || ||||||| | || || | | || |||||||| | | | ||||| Sbjct 27545 CTACAAGCAGCGAGTTTCTAACGCCATGCTCTTTGATTTTCAATTTTAGAGCAGTCCAAT 27486 Query 154195 TCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCG 154254 ||| | | | || ||| | || |||||| ||||| |||| || ||| ||| ||| Sbjct 27485 CCCAAAGGCTTGTGGGTGTCTTGTCCCACATATCGTACTGCAGAATTCCCTTGCTCACCG 27426 Query 154255 GACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTA 154314 ||| || || | || || |||| | || |||| || |||||||| || | Sbjct 27425 GACAACCAGCGTAGGTTTCATAGGGACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAA 27366 Query 154315 ACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCACTTT 154374 || ||||||| | ||||||| || || | || | || | |||||||||||| | Sbjct 27365 GGGCACCATAGTAGATGGTTTCGAAGATCTGCTGATTGAGCAATACGGCTTTGTCACTCT 27306 Query 154375 CGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCAACGG 154434 | || || || | || | | || || ||||| | || |||| ||| | |||| || Sbjct 27305 CATAGGGAAAACGCATCAGAATTAAGGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGG 27246 Query 154435 GTCTGTGTTTTAAATTCGATT-CTTTGGCAGCCTC---CAGAGGATAATAATTGATATCG 154490 | | ||| ||||||| |||| ||||| |||| ||| ||||| ||||||||||| Sbjct 27245 GACGATGTCTTAAATTGGATTTCTTTG----CCTCGGGCAGCGGATAGTAATTGATATCA 27190 Query 154491 ATAATTTTATT 154501 || ||||| || Sbjct 27189 ATGATTTTGTT 27179 >seq4710 Length=78879 Score = 118 bits (130), Expect = 1e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| |||| | ||||| | || || ||||||||||| Sbjct 8634 GTCGACTCCTTCTGGATGTTGTAGTCTGACAGAGTGCGACCATCCTCCAGCTGCTTGCCA 8693 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| |||||||| || || || |||||||| || ||||| || || ||| Sbjct 8694 GCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTTGTCTTGGATCTTAGCCTTC 8753 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | |||||| | ||||| || | || | |||||| || |||| || Sbjct 8754 ACATTCTCAATGGTATCAGATGGCTCCACCTCCAGGGTGATGGTCTTTCCAGTCAGGGTC 8813 Query 64427 TTTACGAAAATTTGCATTTT 64446 || ||||| ||||||||||| Sbjct 8814 TTCACGAAGATTTGCATTTT 8833 >SEQ10860 Length=7223 Score = 111 bits (122), Expect = 2e-19 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||||| | || | || || |||||||| || |||||||| | Sbjct 1453 ACCACCGCGAAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGA 1512 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| | |||||||||||| | || | ||||| || || ||||| Sbjct 1513 AAGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGG 1572 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCG--TC 64392 |||||||||||| || || | | || ||||| ||| || | |||| ||| || || Sbjct 1573 AATTCCTTCTTTGTCCTG-AATCTTGGCTTTGACATTTTCAATGGTAT--CCGACGGTTC 1629 Query 64393 CACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | ||| | |||||| || || | ||||| ||||| |||||||| Sbjct 1630 GACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCAT 1680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499356848456200