Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq61 147 2e-30
seq4710 118 1e-21
SEQ10860 111 2e-19
>seq61
Length=55249
Score = 147 bits (162), Expect = 2e-30
Identities = 552/851 (65%), Gaps = 21/851 (2%)
Strand=Plus/Minus
Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTG--TATTGCACAATTTCTGCGC 154644
|| ||||| ||||| |||||||| || || | | | | |||| |||||||| | ||
Sbjct 27090 GATGCCAAATTGCAGACGGCAATCTCATCGGG--TGCCGAATATTCAACAATTTCAGTGC 27033
Query 154645 ACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGT 154704
| | || |||||| |||||||| | || | |||||| || ||||||| | ||
Sbjct 27032 AGAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGT 26973
Query 154705 CTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTG--TGCGAAA 154762
| ||| | | |||||||| ||||| || || ||||| | ||||| ||| | | | |||
Sbjct 26972 CCTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAA 26913
Query 154763 CAGACTTCGCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAG 154822
|| || | || | || || | | ||| |||||||| || | | |||||
Sbjct 26912 GAG--TTTGTGCTTTAATCACACGATTTGCGCGACCCTCGCTCTCGTACTTTGTATACAG 26855
Query 154823 TTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAA 154882
|| ||||| || | | ||||| ||| |||||||| || ||||||| ||
Sbjct 26854 CTTCTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAG 26795
Query 154883 TGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTA 154942
||||| || || | || || |||||||||| ||| || | |||||| |||||
Sbjct 26794 CGACCAATCCTCATTGGCCTCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTA 26735
Query 154943 CAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATC 155002
|| | |||||| || | | ||||| |||| |||| || | | ||| || ||
Sbjct 26734 GAAGAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTGTTCTTTTTGAGGTCCAAGAACTC 26675
Query 155003 ATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTTTCCTCC 155062
| | || |||| ||||| || || | || | ||| | |||||| || || || ||
Sbjct 26674 AAAGATATCGGAATGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGTCGCTTGCCGCC 26615
Query 155063 ---TTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCT 155119
|||||| || | ||| | |||||| |||| | | || || ||| || |
Sbjct 26614 ACCTTGATCGACATAACGAGCCACATTATTAAACACTCTGAGCATGGGCACCAAACCATT 26555
Query 155120 GGCCGTGCCGTTGGTGCCACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAAC 155179
| ||||| || ||||||| |||| | |||| ||||| ||| ||||| |
Sbjct 26554 TGAAGTGCCATTAGTGCCACAGATCGAGGTGCCCTTGGCACGAATACAATGCACATTGA- 26496
Query 155180 GCCCAAA-CCTCCGCCGTATTTAGATAT--TTGCGCACAGTCCGCCAAAGTTTCGTACAT 155236
|||||| || || || |||| || || |||| ||| | || | | || | | ||
Sbjct 26495 GCCCAATGCCACCAGCGGATTTGGAGATCATTGCACACTGCTCGACGGACTT--GAAAAT 26438
Query 155237 TCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGG 155296
|||| |||| || || || || | ||||||||| || | || || ||
Sbjct 26437 GCCTTCGATGGAATCGGAAACCATTGTTAAAAGGAAACACGATGACATCTGGGGACGATT 26378
Query 155297 GCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTA-AG- 155354
| | | || |||||||| || || || || ||||| || ||| || | | ||
Sbjct 26377 GGTGGCAGCAGCAAATAACGTTGGCGATGCATGCGTAAA-ATAGCGTTC-CGATAACAGA 26320
Query 155355 TTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATC 155414
|||||||| |||| |||| || ||||| || || || || |||||||| | ||||
Sbjct 26319 TTGTAAGTCTCGACAGCGGAATCGATGTCTTCGCCATGGATTCCAATCGCCACTCTCATC 26260
Query 155415 AGCATGTGTTG 155425
|||||||| ||
Sbjct 26259 AGCATGTGCTG 26249
Score = 127 bits (140), Expect = 2e-24
Identities = 288/431 (67%), Gaps = 8/431 (2%)
Strand=Plus/Minus
Query 154075 ACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACG 154134
||||||| || || || || || || | || || || |||| ||| |||||||| |
Sbjct 27605 ACGGCTCAAAGGACTCATTATTACCCATGATCTGGGCAGTAGATGCCGTGGGCATTGGAG 27546
Query 154135 CCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAAT 154194
| || | || ||||||| | || || | | || |||||||| | | | |||||
Sbjct 27545 CTACAAGCAGCGAGTTTCTAACGCCATGCTCTTTGATTTTCAATTTTAGAGCAGTCCAAT 27486
Query 154195 TCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCG 154254
||| | | | || ||| | || |||||| ||||| |||| || ||| ||| |||
Sbjct 27485 CCCAAAGGCTTGTGGGTGTCTTGTCCCACATATCGTACTGCAGAATTCCCTTGCTCACCG 27426
Query 154255 GACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTA 154314
||| || || | || || |||| | || |||| || |||||||| || |
Sbjct 27425 GACAACCAGCGTAGGTTTCATAGGGACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAA 27366
Query 154315 ACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCACTTT 154374
|| ||||||| | ||||||| || || | || | || | |||||||||||| |
Sbjct 27365 GGGCACCATAGTAGATGGTTTCGAAGATCTGCTGATTGAGCAATACGGCTTTGTCACTCT 27306
Query 154375 CGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCAACGG 154434
| || || || | || | | || || ||||| | || |||| ||| | |||| ||
Sbjct 27305 CATAGGGAAAACGCATCAGAATTAAGGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGG 27246
Query 154435 GTCTGTGTTTTAAATTCGATT-CTTTGGCAGCCTC---CAGAGGATAATAATTGATATCG 154490
| | ||| ||||||| |||| ||||| |||| ||| ||||| |||||||||||
Sbjct 27245 GACGATGTCTTAAATTGGATTTCTTTG----CCTCGGGCAGCGGATAGTAATTGATATCA 27190
Query 154491 ATAATTTTATT 154501
|| ||||| ||
Sbjct 27189 ATGATTTTGTT 27179
>seq4710
Length=78879
Score = 118 bits (130), Expect = 1e-21
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || |||||||| |||| | ||||| | || || |||||||||||
Sbjct 8634 GTCGACTCCTTCTGGATGTTGTAGTCTGACAGAGTGCGACCATCCTCCAGCTGCTTGCCA 8693
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||| |||||||| || || || |||||||| || ||||| || || |||
Sbjct 8694 GCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTTGTCTTGGATCTTAGCCTTC 8753
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| ||| | |||||| | ||||| || | || | |||||| || |||| ||
Sbjct 8754 ACATTCTCAATGGTATCAGATGGCTCCACCTCCAGGGTGATGGTCTTTCCAGTCAGGGTC 8813
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| ||||| |||||||||||
Sbjct 8814 TTCACGAAGATTTGCATTTT 8833
>SEQ10860
Length=7223
Score = 111 bits (122), Expect = 2e-19
Identities = 166/231 (72%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | ||||| | || | || || |||||||| || |||||||| |
Sbjct 1453 ACCACCGCGAAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGA 1512
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | ||||| | |||||||||||| | || | ||||| || || |||||
Sbjct 1513 AAGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGG 1572
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCG--TC 64392
|||||||||||| || || | | || ||||| ||| || | |||| ||| || ||
Sbjct 1573 AATTCCTTCTTTGTCCTG-AATCTTGGCTTTGACATTTTCAATGGTAT--CCGACGGTTC 1629
Query 64393 CACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || | ||| | |||||| || || | ||||| ||||| ||||||||
Sbjct 1630 GACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCAT 1680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499356848456200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |