Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_011044.1 Length=69904 Score E Sequences producing significant alignments: (Bits) Value seq2825 132 2e-26 >seq2825 Length=19190 Score = 132 bits (146), Expect = 2e-26 Identities = 473/724 (65%), Gaps = 38/724 (5%) Strand=Plus/Minus Query 46088 GATGTCGTCGCCGAACTCGTCCACCTCGCGGGTCTCGGCCCCGGTGTCGAGCGCTGTCAG 46147 ||| |||| ||| ||||| | ||| ||||||||||| ||| || |||| ||||| Sbjct 6807 GATCTCGTTGCCCTCGTCGTCGAACTCCTGGGTCTCGGCCTCGGCGTAGAGCTGGGTCAG 6748 Query 46148 GCTGACCAGCTTCATGGCGCGCGTGGA-CCCGGCCAGGTCGAGCACCAGGGCGTCGTCCT 46206 | || | || ||| || |||| | | | ||||| ||||||| ||||| |||||| || Sbjct 6747 GGTGGCGAGTTTCTTGTCGCG-GAGCATCCCGGTGAGGTCGATGACCAGTGCGTCGGTCT 6689 Query 46207 TGT-----------------TCGG-GTACAGGCGCAGCGCC-CGGCCAACCATCTGGCTG 46247 ||| |||| ||| || || | |||| || || || || || | Sbjct 6688 TGTCCTGTCCGGTGTCCGGGTCGGTGTAGAGACGGA-CGCCACGTCCGACAATTTGCGCG 6630 Query 46248 TACAGGTTGCGGCTG--CGGGTCGGCCGCGCCAGCACCACCGTGTCGCACATCGGGAAGT 46305 | || | || ||| | ||| || || |||||||| || ||| || ||||||| Sbjct 6629 AAAAG--TACGTCTGACCTGGTAGGACGTGCCAGCACGACACAGTCACAGCGGGGGAAGT 6572 Query 46306 CCGCGCCCTCGGTGAGCACCTGCACCGTGACCAGCGCCTTGGCCGCACCGCTGCGGAAGC 46365 ||||||||||||||||||||||||| ||||||| ||| | | ||||||||||| | Sbjct 6571 CCGCGCCCTCGGTGAGCACCTGCACAGTGACCATGGCCCGGATTTCGCCGCTGCGGAA-C 6513 Query 46366 TCTC-GTAGATGGGCAGCCGGTCGGCGTAGCTGATCGC-GCCGGTAACCGCCACGGCCGG 46423 | | |||||| | |||| || || | |||| | || ||||| |||| | || || Sbjct 6512 TGGCGGTAGATTTCCTGCCGCTCCGCCTTGCTG-TGGCTGCCGGACACCGACCGGGTGGG 6454 Query 46424 ATAGTCG-GCGTCGGTGAGCGCGTCAGCGATGTGGTGGGCGGCGTCGACACTGGCCGCGA 46482 ||| || ||| |||||||| || | || | | | | | ||||| | |||| Sbjct 6453 GTAGCCGCGCG-CGGTGAGCTCGGCGGCCAGCTCCTCGCCCTGCTCGACGGACACGGCGA 6395 Query 46483 AGATGATAGGGCGGCGGTCGGTGGCGTGCAGCTTGATCGCGTCCACGACGTACTGCGTGC 46542 ||||||| ||| |||||||| |||||| | | ||||| ||| | | | | Sbjct 6394 AGATGATCGGGACGCGGTCGGCGGCGTGGCGGAGCACGGCGTCGACGGTGGTCGGGATCG 6335 Query 46543 AGGCTTCCATCACCTCGGCCAGCTCGCCCTGGTGGAAGTCACCGGCCACGCTGCGCACGT 46602 |||| ||| |||||| |||| ||| ||| | | |||| ||| | || | | Sbjct 6334 AGGCACGCATGACCTCGTCCAGGTCGGACTGTTTGTAGTCTCCGCCGACCGTCTTGATCC 6275 Query 46603 CGTTGAGGGCGTCCAGGCCCTTGATCCGCACCGTGAGGCCACGGGGCTGCACCAGGAAGC 46662 | |||| || |||| || | | ||| || || || |||||| | || ||||| | Sbjct 6274 GGGCGAGGAGGTTCAGGTGCTCGGTGACCACGGTCAGCCCGCGGGGCGGGACGAGGAACC 6215 Query 46663 CCTTCTTGATGGCCCAGCGAATGTCCTTCTCGTAGCTGATCTTCTGGATAACGTCGCCCA 46722 | || | ||| ||||| | ||| |||| || |||| |||| || ||||| Sbjct 6214 CGTTGTCGATCGCCCACTTCAGGTCGCGCTCGAAGGCGATC--GTGGACCACACCGCCC- 6158 Query 46723 GGCCGATTACGCCGCGCTCGTTGCGGTACATGGTGGCGGTGAGCCCGCACATCAGGGCGT 46782 || || | |||| || ||| ||||||||| |||| ||||| ||||| | Sbjct 6157 --CCAGTTTC-CCGCCGTCAGCGCGCGTCATGGTGGCAGTGAAACCGCAGGCCAGGGGGC 6101 Query 46783 CGTC 46786 |||| Sbjct 6100 CGTC 6097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 223442376092825