Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_011044.1
Length=69904
Score E
Sequences producing significant alignments: (Bits) Value
seq2825 132 2e-26
>seq2825
Length=19190
Score = 132 bits (146), Expect = 2e-26
Identities = 473/724 (65%), Gaps = 38/724 (5%)
Strand=Plus/Minus
Query 46088 GATGTCGTCGCCGAACTCGTCCACCTCGCGGGTCTCGGCCCCGGTGTCGAGCGCTGTCAG 46147
||| |||| ||| ||||| | ||| ||||||||||| ||| || |||| |||||
Sbjct 6807 GATCTCGTTGCCCTCGTCGTCGAACTCCTGGGTCTCGGCCTCGGCGTAGAGCTGGGTCAG 6748
Query 46148 GCTGACCAGCTTCATGGCGCGCGTGGA-CCCGGCCAGGTCGAGCACCAGGGCGTCGTCCT 46206
| || | || ||| || |||| | | | ||||| ||||||| ||||| |||||| ||
Sbjct 6747 GGTGGCGAGTTTCTTGTCGCG-GAGCATCCCGGTGAGGTCGATGACCAGTGCGTCGGTCT 6689
Query 46207 TGT-----------------TCGG-GTACAGGCGCAGCGCC-CGGCCAACCATCTGGCTG 46247
||| |||| ||| || || | |||| || || || || || |
Sbjct 6688 TGTCCTGTCCGGTGTCCGGGTCGGTGTAGAGACGGA-CGCCACGTCCGACAATTTGCGCG 6630
Query 46248 TACAGGTTGCGGCTG--CGGGTCGGCCGCGCCAGCACCACCGTGTCGCACATCGGGAAGT 46305
| || | || ||| | ||| || || |||||||| || ||| || |||||||
Sbjct 6629 AAAAG--TACGTCTGACCTGGTAGGACGTGCCAGCACGACACAGTCACAGCGGGGGAAGT 6572
Query 46306 CCGCGCCCTCGGTGAGCACCTGCACCGTGACCAGCGCCTTGGCCGCACCGCTGCGGAAGC 46365
||||||||||||||||||||||||| ||||||| ||| | | ||||||||||| |
Sbjct 6571 CCGCGCCCTCGGTGAGCACCTGCACAGTGACCATGGCCCGGATTTCGCCGCTGCGGAA-C 6513
Query 46366 TCTC-GTAGATGGGCAGCCGGTCGGCGTAGCTGATCGC-GCCGGTAACCGCCACGGCCGG 46423
| | |||||| | |||| || || | |||| | || ||||| |||| | || ||
Sbjct 6512 TGGCGGTAGATTTCCTGCCGCTCCGCCTTGCTG-TGGCTGCCGGACACCGACCGGGTGGG 6454
Query 46424 ATAGTCG-GCGTCGGTGAGCGCGTCAGCGATGTGGTGGGCGGCGTCGACACTGGCCGCGA 46482
||| || ||| |||||||| || | || | | | | | ||||| | ||||
Sbjct 6453 GTAGCCGCGCG-CGGTGAGCTCGGCGGCCAGCTCCTCGCCCTGCTCGACGGACACGGCGA 6395
Query 46483 AGATGATAGGGCGGCGGTCGGTGGCGTGCAGCTTGATCGCGTCCACGACGTACTGCGTGC 46542
||||||| ||| |||||||| |||||| | | ||||| ||| | | | |
Sbjct 6394 AGATGATCGGGACGCGGTCGGCGGCGTGGCGGAGCACGGCGTCGACGGTGGTCGGGATCG 6335
Query 46543 AGGCTTCCATCACCTCGGCCAGCTCGCCCTGGTGGAAGTCACCGGCCACGCTGCGCACGT 46602
|||| ||| |||||| |||| ||| ||| | | |||| ||| | || | |
Sbjct 6334 AGGCACGCATGACCTCGTCCAGGTCGGACTGTTTGTAGTCTCCGCCGACCGTCTTGATCC 6275
Query 46603 CGTTGAGGGCGTCCAGGCCCTTGATCCGCACCGTGAGGCCACGGGGCTGCACCAGGAAGC 46662
| |||| || |||| || | | ||| || || || |||||| | || ||||| |
Sbjct 6274 GGGCGAGGAGGTTCAGGTGCTCGGTGACCACGGTCAGCCCGCGGGGCGGGACGAGGAACC 6215
Query 46663 CCTTCTTGATGGCCCAGCGAATGTCCTTCTCGTAGCTGATCTTCTGGATAACGTCGCCCA 46722
| || | ||| ||||| | ||| |||| || |||| |||| || |||||
Sbjct 6214 CGTTGTCGATCGCCCACTTCAGGTCGCGCTCGAAGGCGATC--GTGGACCACACCGCCC- 6158
Query 46723 GGCCGATTACGCCGCGCTCGTTGCGGTACATGGTGGCGGTGAGCCCGCACATCAGGGCGT 46782
|| || | |||| || ||| ||||||||| |||| ||||| ||||| |
Sbjct 6157 --CCAGTTTC-CCGCCGTCAGCGCGCGTCATGGTGGCAGTGAAACCGCAGGCCAGGGGGC 6101
Query 46783 CGTC 46786
||||
Sbjct 6100 CGTC 6097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 223442376092825
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |