Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_011270.1
Length=154906
Score E
Sequences producing significant alignments: (Bits) Value
SEQ29447 141 9e-29
SEQ32872 136 4e-27
SEQ26880 123 2e-23
>SEQ29447
Length=7397
Score = 141 bits (156), Expect = 9e-29
Identities = 114/137 (83%), Gaps = 3/137 (2%)
Strand=Plus/Minus
Query 77133 ATGTACGCCAACAATGCGGTGCCGGAGTCGCTGAACTTCCCGCACGACGCCATTGGCAGT 77192
|||||||||| ||||||||| |||||||||||||||| |||||||||||| || || ||
Sbjct 5605 ATGTACGCCAGCAATGCGGTTCCGGAGTCGCTGAACTACCCGCACGACGCGATCGGGAGC 5546
Query 77193 GACCATGACTCGGTCGGCCTGTTCCAGCAGCGTCCGTCC---TGGGGCACGGTGGCCCAG 77249
|||||||| || |||| |||||||||||||||| | || |||||||| || || |||
Sbjct 5545 GACCATGATTCCATCGGTCTGTTCCAGCAGCGTCAGGCCGGGTGGGGCACCGTCGCACAG 5486
Query 77250 CGGATGAACCCGCGCGA 77266
|| ||| | |||| |||
Sbjct 5485 CGTATGGATCCGCACGA 5469
>SEQ32872
Length=2637
Score = 136 bits (150), Expect = 4e-27
Identities = 117/145 (81%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 113617 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 113676
||||||||||||||||||||||| ||| | |||||| |||||| || ||||||
Sbjct 191 CGGCCCGGGCCGTGGCTCCGCCGCCGGCGCCCTGGTCGCCTACGCACTGACGATCACCAA 250
Query 113677 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGA 113736
|||||||| ||| || ||| |||||||||||||| ||| |||||||||| ||||||
Sbjct 251 CATCGACCCCATCGAGCACGGGCTGATGTTCGAGCGATTCCTCAACCCGGAACGCCCCTC 310
Query 113737 CTTCCCCGACATCGACGTCGACTTC 113761
| |||||| |||||| ||||||||
Sbjct 311 CGCCCCCGATATCGACATCGACTTC 335
>SEQ26880
Length=5820
Score = 123 bits (136), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 142126 ATCAGCGAGAAGGGCATTGTCATCGCGCTCGCCGTCGCCCTGGTCGAGACCAACCTCAAG 142185
|||||||| |||||||| ||||| |||||| ||| ||||| ||| | | | |||
Sbjct 1571 ATCAGCGACCAGGGCATTAAAATCGCCCTCGCCACCGCACTGGTGGAGTCAGGCATGAAG 1512
Query 142186 ATGTACGCCAATCGGTCGGACCCGGAGAGCCTCAATTTCCCGCACGACGCGGTCGGCAGC 142245
||||||||||| | | ||| || ||| | | || ||||| ||||| ||||||||| ||
Sbjct 1511 ATGTACGCCAACCCGGCGGTGCCTGAGTCCATGAACTTCCCCCACGATGCGGTCGGCGGC 1452
Query 142246 GACGCCAACAGCGTCGGCGTCTTCCAGCAGCGCG---CTCCCTGGTGGGGCACGGTCGCC 142302
||||| || |||||| | ||||||||||||| | | ||||||||| |||
Sbjct 1451 GACGCGGACTCGGTCGGCCTTTTCCAGCAGCGCGACAATGGCGCGTGGGGCACCATCGAA 1392
Query 142303 GATCGCATGGACGTCGCGCGCAGCGCGGCGATGTTCTACAAC 142344
|| ||||||||| | ||| ||| | ||||||||| ||
Sbjct 1391 GACCGCATGGACCCTGAGCGGTCCGCCGGAATGTTCTACGAC 1350
Score = 89.7 bits (98), Expect = 5e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 77133 ATGTACGCCAACAATGCGGTGCCGGAGTCGCTGAACTTCCCGCACGACGCCATTGGCAGT 77192
|||||||||||| |||||||| ||||| |||||||||| ||||| || | ||| |
Sbjct 1511 ATGTACGCCAACCCGGCGGTGCCTGAGTCCATGAACTTCCCCCACGATGCGGTCGGCGGC 1452
Query 77193 GACCATGACTCGGTCGGCCTGTTCCAGCAGCG 77224
||| |||||||||||||| |||||||||||
Sbjct 1451 GACGCGGACTCGGTCGGCCTTTTCCAGCAGCG 1420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495285596122800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |