Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
SEQ45358 284 1e-71
SEQ37717 284 1e-71
SEQ44616 132 5e-26
SEQ26880 114 1e-20
SEQ29447 102 9e-17
SEQ41030 82.4 8e-11
>SEQ45358
Length=678
Score = 284 bits (314), Expect = 1e-71
Identities = 301/394 (76%), Gaps = 2/394 (1%)
Strand=Plus/Minus
Query 155934 CGCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGAC 155993
||| |||||||||||| | | |||||||||||| |||||| ||| ||||||||||
Sbjct 397 CGCGATCAACTGGAACACCATCCCGGACGAGAAGGACCTGGAGGTCTGGGACCGGCTGAC 338
Query 155994 CAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCA 156053
| |||||||||||||| |||||| | ||| ||||||| ||| || || ||| |
Sbjct 337 CGGAAACTTCTGGCTGCCCGAGAAGGTGCCGCTGTCCAACGACATCAAGAGCTGGGGCAC 278
Query 156054 GCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGA 156113
||| ||||||| ||| | |||||||||||| |||||||| ||||| ||||||||
Sbjct 277 GCTCACCGAGGCGGAGAAGACCACCACCATGCGGGTCTTCACCGGTCTGACCATGCTGGA 218
Query 156114 CACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGA 156173
||||||||||||||||||||| ||| | |||||| ||| || |||| || |||||
Sbjct 217 CACCATCCAGGGCACCGTCGGTGCGACCAGCCTCATCGAGGATTCCGTCACGCCCCACGA 158
Query 156174 GGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGC-ACGCAGCTACTCGA 156232
||||||||||| |||||||||||| ||||||||| ||||||||| ||| |||||||
Sbjct 157 GGAGGCGGTGTTCACCAACATCGCCTTCATGGAGTCCGTGCACGCGACGTC-CTACTCGT 99
Query 156233 ACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGG 156292
|||||| | |||| |||| || | | || ||||||| |||||||||||||||
Sbjct 98 CGATCTTCATGCCGCTCGCCTCCGCCCCGCCGCTCCACGCCGCCTTCCGCTGGTCGGAGT 39
Query 156293 AGAACGCCAACCTGCAGAAGAAGGCTGAGATCGT 156326
| | | |||||||| ||||| || || ||
Sbjct 38 CGTCCCAGACCCTGCAGAGCAAGGCCGATATAGT 5
>SEQ37717
Length=2411
Score = 284 bits (314), Expect = 1e-71
Identities = 329/441 (75%), Gaps = 26/441 (6%)
Strand=Plus/Plus
Query 152886 ATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGCG 152945
|| |||||||| ||||||||||| || || || || |||||| || || || || ||
Sbjct 1348 ATGTTCGAGAGGTTCACCGACCGTGCGCGGCGTGTTGTCGTCCTGGCGCAGGAAGAGGCC 1407
Query 152946 CGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGGGCTGGTCCACGAG 153005
||| ||||||||| |||||||| |||||||| | |||||||| ||| ||||||||
Sbjct 1408 CGCGCGCTCAACCACAACTACATCGGGACCGAGCACATCCTGCTCGGCCTGATCCACGAG 1467
Query 153006 GGCGAGGGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCGT 153065
|| ||||||| || | || || ||| |||||||| || ||
Sbjct 1468 GGAGAGGGCGNNTCC---ATGG--------------GA-ATCTCCCTGGAGGCCGTCCGG 1509
Query 153066 GCCGAGGTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCACCG---GGC-ACATCCC 153121
|||| | |||||| ||||||||| |||| | | ||||| ||| ||| |||||||
Sbjct 1510 ACCGAAGGCGAGGACATCATCGGC-ACGG---GTGGACACCCGCCGAACGGCTACATCCC 1565
Query 153122 GTTCACCGACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGG 153181
|||||| ||| ||||| || |||||||| | ||||||||||| |||||||||||
Sbjct 1566 CTTCACCCCGCGCGCCAAGAAGGTGCTGGAGCTCGCCCTGCGCGAGGCCCTGCAGCTCGG 1625
Query 153182 CCACAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGCGT 153241
|||||| |||||||| |||||||| ||||||| | ||||||||||||||||||||||||
Sbjct 1626 CCACAAGTACATCGGGACCGAGCACATCCTGCTCGGCCTGATCCGCGAGGGTGAGGGCGT 1685
Query 153242 GGGCTGCCAGGTGCTGGTGAAGCGCGGCGCGGAGCTGACCAAGGTCCGCCAGGTGGTCAT 153301
| ||||||||| || |||| |||||| || ||| || ||||| ||| ||||||
Sbjct 1686 CGCAGCCCAGGTGCTCGTCAAGCTCGGCGCCGACCTGTCCCGCGTCCGGCAGCAGGTCAT 1745
Query 153302 CCAGCTGCTGTCCGGGTATGA 153322
||||||||| || || || ||
Sbjct 1746 CCAGCTGCTCTCGGGTTACGA 1766
>SEQ44616
Length=1890
Score = 132 bits (146), Expect = 5e-26
Identities = 163/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 155941 AACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACCAACAAC 156000
||||||||||| | | |||| |||||| ||||| ||| | ||||| |||| ||||
Sbjct 225 AACTGGAACCGGATCACCGACCCCAAGGACCTCGAGGTCTGGCAGCGGCTCACCAGCAAC 166
Query 156001 TTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGT-CCAGTCGTGGCACCAGCTGAC 156059
|||||| |||||||||| | ||| ||||||||||| | || | | |||| ||
Sbjct 165 TTCTGGTTGCCGGAGAAAGTGCCGCTGTCCAATGACCTGCCCGAC-TGGCGGGCACTCGG 107
Query 156060 CGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGACACCAT 156119
||| || || ||| |||||| ||||| |||||||| |||||| |||||||||| |
Sbjct 106 CGACGAGGACCGCACCCTCACCACCCGGGTCTTCACCGGGCTGACGCTGCTGGACACGGT 47
Query 156120 CCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCC 156159
||||| ||||||||| ||| || | ||||||| |||
Sbjct 46 CCAGGCCACCGTCGGAGCGCTCAGCCAGCTCCCGGATGCC 7
>SEQ26880
Length=5820
Score = 114 bits (126), Expect = 1e-20
Identities = 121/157 (77%), Gaps = 8/157 (5%)
Strand=Plus/Minus
Query 78191 ATGTACGCCAACACCGCCGTGCCCGAGTCGCTGAACTTCCCGCACGAGGCCGTCGGCCAC 78250
|||||||||||| | || ||||| ||||| |||||||||| ||||| || |||||| |
Sbjct 1511 ATGTACGCCAACCCGGCGGTGCCTGAGTCCATGAACTTCCCCCACGATGCGGTCGGCGGC 1452
Query 78251 GACCACGACTCGGTGGGCCTGTTCCAGCAGCGCCAGA------CCTGGGGCACCATCGAC 78304
||| |||||||| ||||| |||||||||||| | | | ||||||||||||||
Sbjct 1451 GACGCGGACTCGGTCGGCCTTTTCCAGCAGCGCGACAATGGCGCGTGGGGCACCATCGAA 1392
Query 78305 CAGCGCATGAACCC-CCGCGAGTCGGCGGGCATGTTC 78340
| |||||| |||| ||| ||| || || ||||||
Sbjct 1391 GACCGCATGGACCCTGAGCG-GTCCGCCGGAATGTTC 1356
>SEQ29447
Length=7397
Score = 102 bits (112), Expect = 9e-17
Identities = 105/137 (77%), Gaps = 3/137 (2%)
Strand=Plus/Minus
Query 78191 ATGTACGCCAACACCGCCGTGCCCGAGTCGCTGAACTTCCCGCACGAGGCCGTCGGCCAC 78250
|||||||||| || || || || ||||||||||||| ||||||||| || |||| |
Sbjct 5605 ATGTACGCCAGCAATGCGGTTCCGGAGTCGCTGAACTACCCGCACGACGCGATCGGGAGC 5546
Query 78251 GACCACGACTCGGTGGGCCTGTTCCAGCAGCGCCAGACC---TGGGGCACCATCGACCAG 78307
||||| || || | || |||||||||||||| ||| || ||||||||| ||| |||
Sbjct 5545 GACCATGATTCCATCGGTCTGTTCCAGCAGCGTCAGGCCGGGTGGGGCACCGTCGCACAG 5486
Query 78308 CGCATGAACCCCCGCGA 78324
|| ||| | || | |||
Sbjct 5485 CGTATGGATCCGCACGA 5469
>SEQ41030
Length=702
Score = 82.4 bits (90), Expect = 8e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 92611 CGTAGCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTC 92670
||| ||||||| ||||||||||||||||||| ||||||||||| |||| ||| |||||
Sbjct 140 CGTCGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGTAGGTTC 199
Query 92671 AAATCCCACTCCCGCCAC 92688
||||| | ||||| ||
Sbjct 200 GAATCCTGCCCCCGCTAC 217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526294914759600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |