Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_011291.1 Length=47057 Score E Sequences producing significant alignments: (Bits) Value SEQ30131 262 1e-65 >SEQ30131 Length=2206 Score = 262 bits (290), Expect = 1e-65 Identities = 321/434 (74%), Gaps = 7/434 (2%) Strand=Plus/Plus Query 40782 AAGGAGG--ACTAGATGCGCATCAGGTCAACCAAACCCGAGTTCTGGCGTTCCGAGCGCA 40839 ||||||| || || || | ||||| || || || || ||||||||| |||| || | Sbjct 1674 AAGGAGGGGAC-AGGTGAGGATCAGATCGACGAAGCCGGAGTTCTGGAGTTCGAAGACGA 1732 Query 40840 TCGCGTCGGTGTCG--TGGGACGCGCGCCTGGTGCTCAAGGGACTCGAGTCGTACGTCGA 40897 | ||| | ||||| ||||| ||||| ||||| ||||||||||| ||| || ||||| Sbjct 1733 TAGCGGC--TGTCGACTGGGATGCGCGTCTGGTCCTCAAGGGACTTGAGAGCTATGTCGA 1790 Query 40898 TGACAACGGCGTCGGCAAGGACGACATCGCGTTGATCGTCGGCGACGTGTTCCCTCGCGA 40957 |||||| || || ||| ||| ||||| || |||||||| || |||||| |||||| Sbjct 1791 TGACAATGGTGTGGGCCGGGATGACATTGCTCTGATCGTCTCGGAAGTGTTCGTTCGCGA 1850 Query 40958 CATGCTCGCGAACCCTCGCGACACTTACGCGAGGGTGTCCGAAGCGATTTCCGAGCTTCA 41017 | |||||| |||||||| ||| |||||||||||||||||| |||||| |||| Sbjct 1851 CCATTTCGCGAGGCCTCGCGAGACTGTCGCGAGGGTGTCCGAAGCCATTTCCCAGCTGAC 1910 Query 41018 CCAAGCCGGTCTGCTGTGGCGCTACGAGGCTGAAAACACCCGACTGCTGTTCGTCTCGTG 41077 |||||||||| || ||| | |||||||| || | | || | | | | ||| Sbjct 1911 TGAAGCCGGTCTCCTATGGAGATACGAGGCCGATGGTAATGAATTGATATACATTTCGAA 1970 Query 41078 GTGGGAGGACGTGCAGCGCATCGACAAACCGGGCAAGGGGCGTTTTCCCAGGCCAGACGG 41137 ||||| | | || || |||||||| || ||| || ||||| |||||||||||||| Sbjct 1971 CTGGGACAGCCTCCAACGAATCGACAAGCCAAACAAAGGACGTTTCCCCAGGCCAGACGG 2030 Query 41138 CACGATGAACTATCGCGACTCCGAAATTCGCGAGAGTGTCGCGAGTCCTCGCGAGACCGT 41197 ||| |||||||| || || |||||||||||||||||||| || ||| ||||| Sbjct 2031 CACAATGAACTACAAGGAATCAACGATTCGCGAGAGTGTCGCGAGGGTTCCCGAAACCGT 2090 Query 41198 CGCGCCTGGAACAG 41211 |||||||||||||| Sbjct 2091 CGCGCCTGGAACAG 2104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150378423182190