Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value SEQ22198 93.3 3e-14 >SEQ22198 Length=8495 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||||| |||||| | || || || |||| ||| || ||| ||||| || ||||| Sbjct 3502 TGGGTGCGCGATCATCGTGTGCATCATAAGTTCTCCGAAACGGATGCCGATCCTCACAAT 3561 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 ||||| | || |||| ||||||||||| || ||||| |||||| ||| | || || Sbjct 3562 GCCAATCGTGGCTTCTTCTTCTCGCACGTTGGCTGGCTGATGATGCTGAAGCATCCGGAT 3621 Query 108586 GTGATCTCGGCCGGTC-GAAAAATGGACATGACGGACATATACTCCGATCCGGTGGTAGT 108644 ||| | || | || | || | || || ||||| ||||| ||||||| ||||| Sbjct 3622 GTG-TTGCGTCGGGGCAGACAGATCGATATGACCGACATTGTGGCCGATCCTGTGGTGCA 3680 Query 108645 GTGGCACACCAAGTACTTTATTCCTCTTAAAATTTTGCTCTGTTTTGT 108692 || || |||||||| |||| || || | || ||||||| || Sbjct 3681 GTTCCATCAGAAGTACTTCATTCTGCTAAAGGTCATGTTCTGTTTCGT 3728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381558280074120