Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_011357.1
Length=62147
Score E
Sequences producing significant alignments: (Bits) Value
SEQ46069 176 2e-39
>SEQ46069
Length=509
Score = 176 bits (194), Expect = 2e-39
Identities = 327/478 (68%), Gaps = 4/478 (1%)
Strand=Plus/Minus
Query 61170 GATTCCGGAAATGACGCTTGTGTTGCACTGGCTGACTATATTGCCGGTGGGCAACGGC-- 61227
||| |||| || ||||| || | || |||| |||||| | || || | || |||
Sbjct 483 GATCCCGGCAACGACGCCTGCGGGGCGATGGCGGACTATGTGGCGGGCAGCCA--GGCCA 426
Query 61228 AGTTTGTTGAAATGATGAACAACTATGCCGAGAAGCTGCATCTCAAGGATACGCATTTTG 61287
| || || | |||||||| | | || | ||||| | || | ||||||||||
Sbjct 425 ACTTCGTCAAGCTGATGAACGAGAAGAGCGCGCAGCTGGGATTGCAGAACACGCATTTTG 366
Query 61288 AAACAGTGCATGGTCTGGATGCACCAGGTCAGCATAGCTCGGCTTATGATTTAGCTGTGC 61347
|||| ||||| || |||||||| || || ||| | | | || ||| | || |||
Sbjct 365 AAACGGTGCACGGGCTGGATGCGCCGGGCCAGTTCACCACCGCCGGCGATCTGGCGGTGA 306
Query 61348 TTTCTCGCGCTATCATCCACGGCGAGCCCGAGTTTTATCATATGTACAGTGAGAAAAGTC 61407
|| | ||||| |||||| ||||||| | | || ||||||||||| ||||| |
Sbjct 305 TTGCGCGCGCCATCATCATGCGCGAGCCGGCGGAATACCATATGTACAGCGAGAACTCGC 246
Query 61408 TCACCTGGAACGGTATCACCCAGCAAAACCGTAACGGGTTATTGTGGGATAAAACCATGA 61467
| ||||||| ||| ||||| ||||| | ||| ||||| | ||||||| || ||| ||
Sbjct 245 TGACCTGGAGCGGCATCACGCAGCAGATCCGCAACGGCCTGCTGTGGGACAAGACCCTGC 186
Query 61468 ATGTTGACGGCCTGAAAACGGGTCATACTTCTGGTGCCGGGTTTAATCTCATTGCTTCGG 61527
| || ||||| |||||||| || || || | ||||| || || |||| ||||| |
Sbjct 185 ACGTCGACGGACTGAAAACCGGACACACCGCCTCGGCCGGCTTCAACATCATCGCTTCCG 126
Query 61528 CTGTAGATGGGCAGCGTCGTCTCATTGCAGTGGTAATGGGGGCTGACAGTGCAAAAGGTC 61587
| || || | || ||||| || || ||||| ||||| | | ||| ||||||| |
Sbjct 125 CCACCGAAGGAGATCGCCGTCTGATCGCCGTGGTGATGGGCGGCAAAAGTTCAAAAGGCC 66
Query 61588 GTGAGGAAGAGGCAAGAAAATTACTGCGTTGGGGGCAACAAAACTTTACTACGGTGCA 61645
| |||||| |||| | || | ||| | ||||||| | |||||| ||||| ||
Sbjct 65 GCGAGGAACAGGCGCGCAAGCTGCTGAGCTGGGGGCTGCGCGACTTTAGCACGGTACA 8
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 198639985653090
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |