Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value SEQ46069 176 2e-39 >SEQ46069 Length=509 Score = 176 bits (194), Expect = 2e-39 Identities = 327/478 (68%), Gaps = 4/478 (1%) Strand=Plus/Minus Query 61170 GATTCCGGAAATGACGCTTGTGTTGCACTGGCTGACTATATTGCCGGTGGGCAACGGC-- 61227 ||| |||| || ||||| || | || |||| |||||| | || || | || ||| Sbjct 483 GATCCCGGCAACGACGCCTGCGGGGCGATGGCGGACTATGTGGCGGGCAGCCA--GGCCA 426 Query 61228 AGTTTGTTGAAATGATGAACAACTATGCCGAGAAGCTGCATCTCAAGGATACGCATTTTG 61287 | || || | |||||||| | | || | ||||| | || | |||||||||| Sbjct 425 ACTTCGTCAAGCTGATGAACGAGAAGAGCGCGCAGCTGGGATTGCAGAACACGCATTTTG 366 Query 61288 AAACAGTGCATGGTCTGGATGCACCAGGTCAGCATAGCTCGGCTTATGATTTAGCTGTGC 61347 |||| ||||| || |||||||| || || ||| | | | || ||| | || ||| Sbjct 365 AAACGGTGCACGGGCTGGATGCGCCGGGCCAGTTCACCACCGCCGGCGATCTGGCGGTGA 306 Query 61348 TTTCTCGCGCTATCATCCACGGCGAGCCCGAGTTTTATCATATGTACAGTGAGAAAAGTC 61407 || | ||||| |||||| ||||||| | | || ||||||||||| ||||| | Sbjct 305 TTGCGCGCGCCATCATCATGCGCGAGCCGGCGGAATACCATATGTACAGCGAGAACTCGC 246 Query 61408 TCACCTGGAACGGTATCACCCAGCAAAACCGTAACGGGTTATTGTGGGATAAAACCATGA 61467 | ||||||| ||| ||||| ||||| | ||| ||||| | ||||||| || ||| || Sbjct 245 TGACCTGGAGCGGCATCACGCAGCAGATCCGCAACGGCCTGCTGTGGGACAAGACCCTGC 186 Query 61468 ATGTTGACGGCCTGAAAACGGGTCATACTTCTGGTGCCGGGTTTAATCTCATTGCTTCGG 61527 | || ||||| |||||||| || || || | ||||| || || |||| ||||| | Sbjct 185 ACGTCGACGGACTGAAAACCGGACACACCGCCTCGGCCGGCTTCAACATCATCGCTTCCG 126 Query 61528 CTGTAGATGGGCAGCGTCGTCTCATTGCAGTGGTAATGGGGGCTGACAGTGCAAAAGGTC 61587 | || || | || ||||| || || ||||| ||||| | | ||| ||||||| | Sbjct 125 CCACCGAAGGAGATCGCCGTCTGATCGCCGTGGTGATGGGCGGCAAAAGTTCAAAAGGCC 66 Query 61588 GTGAGGAAGAGGCAAGAAAATTACTGCGTTGGGGGCAACAAAACTTTACTACGGTGCA 61645 | |||||| |||| | || | ||| | ||||||| | |||||| ||||| || Sbjct 65 GCGAGGAACAGGCGCGCAAGCTGCTGAGCTGGGGGCTGCGCGACTTTAGCACGGTACA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198639985653090