Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 122 6e-23 seq4983 100 2e-16 >SEQ10860 Length=7223 Score = 122 bits (134), Expect = 6e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15039 ||||| |||||||| || ||||||||| ||| | | | | ||||| ||||| ||||| Sbjct 1484 GTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTCCAATTGCTTGCCG 1543 Query 15040 GCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTT 15099 || | |||||||||||||| || ||||||||||| ||||| ||| ||| ||| Sbjct 1544 GCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTG 1603 Query 15100 ACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTT 15159 ||| |||| || ||||| ||| || || | || ||||| ||||| || || ||| Sbjct 1604 ACATTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTT 1663 Query 15160 TTTACAAAAATTTGCAT 15176 || || || |||||||| Sbjct 1664 TTAACGAAGATTTGCAT 1680 >seq4983 Length=3163 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| |||| | | || || |||||||| || || || || |||||||| ||| Sbjct 642 TGCCACCACGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGG 701 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | | ||||| || || || || ||| | ||||||||||| || || | Sbjct 702 AGAGGGTACGACCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGG 761 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || |||||||| || ||| || || | || || ||||| || | Sbjct 762 GAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAA 821 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180 | || ||||||||||| || || |||| || |||||||| || ||||||||| Sbjct 822 CCTCCAAGGTAATGGTCTTGCCAGTCAATGTCTTTACAAAGATCTGCATATTT 874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357191179759925