Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq61 277 2e-69 SEQ10860 98.7 9e-16 >seq61 Length=55249 Score = 277 bits (306), Expect = 2e-69 Identities = 941/1460 (64%), Gaps = 42/1460 (3%) Strand=Plus/Plus Query 123235 CCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGG---CGGCAAACGCA 123291 ||||||| |||| | ||||| | | || | ||||| || || |||||| || Sbjct 26568 CCATGCTCAGAGTGTTTAATAATGTGGCTCGTTATGTCGATCAAGGTGGCGGCAAGCGAC 26627 Query 123292 AAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATT 123351 |||||| | || || || || ||||| ||||| ||| | | || || || | Sbjct 26628 CAGGCGCTTTTGCCATTTACCTGGAACCTTGGCATTCCGATATCTTTGAGTTCTTGGACC 26687 Query 123352 TAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGG 123411 | ||| |||| ||| |||||| | | ||| || ||| | || ||||| || ||| Sbjct 26688 TCAAAAAGAACACGGGCAAGGAAGAGCACAGAGCTCGTGATCTCTTCTACGCCTTGTGGA 26747 Query 123412 TACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCG 123471 |||||||| |||||||| || || | | | | | | |||||||| ||||||| Sbjct 26748 TACCCGATCTGTTTATGAAGCGTGTGGAGGCCAATGAGGATTGGTCGCTGTTGTGTCCTC 26807 Query 123472 ATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAAT 123531 | ||||||||||||| ||||||| || || | ||||| || |||| | | | Sbjct 26808 ACAAGTGTCCCGGCTTGGAAGACGTTTGGGGGGATGACTTTGAGAAGCTGTATACAAAGT 26867 Query 123532 ACGAGCGCGAAGG-----CAAACAGGTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATT 123586 ||||| |||| || |||| | || | || |||| | | | | Sbjct 26868 ACGAGAGCGAGGGTCGCGCAAA-----TCGTGTGATTAAAGCACAAACTCTTTGGTATGC 26922 Query 123587 TATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAA 123646 ||| | ||| | ||||| || || || || ||||||||||||| ||| ||| | ||||| Sbjct 26923 CATTGTTGAATCTCAAGTTGAGACTGGCACTCCGTACATGCTCTTCAAGGACTCTTGCAA 26982 Query 123647 CAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706 |||||| | ||||||| || | || || || ||||| || || || ||| | ||||| Sbjct 26983 CAGGAAGAGCAATCAGCAGAATGTTGGCACCATCAAATGCAGCAACCTCTGCACTGAAAT 27042 Query 123707 TATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAA 123766 | | ||||| | ||||| | | ||||| || |||||||| ||||| | |||| Sbjct 27043 TGTTGAATATTCGGCACCCGATGAGATTGCCGTCTGCAATTTGGCATCGATAGCCTTGAA 27102 Query 123767 TCG--TTGCGTC------GAAAACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACA 123818 | ||| | | |||||| || ||||| | | || || | || Sbjct 27103 TATGTTTGTGACTTCAGAGAAAACA-----TTCGATTTCAAGAAACTGAAGGAAGTTACT 27157 Query 123819 AAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAA 123878 |||||||| | |||||||||||||| || ||| | |||| ||||| || || Sbjct 27158 AAAACTGTCACCAGAAATTTGAACAAAATCATTGATATCAATTACTATCCGCTGCCCGAG 27217 Query 123879 GCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGAC 123938 || || ||||| | ||| | || | || | ||| |||| || || |||||| Sbjct 27218 GCAAAGAAATCCAATTTAAGACATCGTCCCATTGGCATTGGCGTTCAGGGCTTTGCCGAC 27277 Query 123939 GCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAA 123998 || || | || |||| | || || || || ||| |||| ||||| ||| ||| Sbjct 27278 GCCTTAATTCTGATGCGTTTTCCCTATGAGAGTGACAAAGCCGTATTGCTCAATCAGCAG 27337 Query 123999 ATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCAC 124058 || |||||| || || || || || | ||||| || || || || || ||| || Sbjct 27338 ATCTTCGAAACCATCTACTATGGTGCCCTTGAGGCCAGTTGTGAGCTGGCTCAAAAGGAC 27397 Query 124059 GGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATG 124118 || | || |||| ||||| || | |||| |||| || ||| |||||||||| ||| Sbjct 27398 GGTCCCTATGAAACCTACGCTGGTTGTCCGGTGAGCAAGGGAATTCTGCAGTACGATATG 27457 Query 124119 TGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACG 124178 ||| | ||||| |||| | ||||| |||| | | ||||| | | ||| | | Sbjct 27458 TGGGACAAGACACCCACAAGCCTTTGGGATTGGACTGCTCTAAAATT--GAAAATCAAAG 27515 Query 124179 --CACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAA 124236 || || | | ||||||||| | || || ||||| |||||| | ||||| || | Sbjct 27516 AGCATGGCGTTAGAAACTCGCTGCTTGTAGCTCCAATGCCCACGGCATCTACTGCCCAGA 27575 Query 124237 TTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGT 124296 | | || || || || ||||| ||||||| ||| || | ||| | || || | Sbjct 27576 TCATGGGTAATAATGAGTCCTTTGAGCCGTATACTTCAAACATTTACACCAGGCGCGTTT 27635 Query 124297 TAGCCGGCGATTTTCAAGTGATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATT 124356 | |||| || || | ||| |||||||||||||| || || || | || ||| Sbjct 27636 TGTCCGGAGAGTTCAATGTGGTAAATCATCATTTGTTGCGGGATTTAACCGAACTAGATT 27695 Query 124357 TGTACGATGAAAACATGCGCAACGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCG 124416 | | ||||| ||||| || |||| ||||| ||||| | | || ||||| Sbjct 27696 TATGGGATGATGACATGAAGAATCAAATCATTGCCAGTCGTGGCTCCATACAAAACATCG 27755 Query 124417 CTTCGATTCCGGAACACGTCAAGCAACTGTACAAAACCGTGTGGGAAAT----GAAAAAT 124472 || ||||| | | || | | || ||||||||||| |||||||| | || | Sbjct 27756 AATCCATTCCTCAGGAAGTACGGGATCTTTACAAAACCGTCTGGGAAATCTCGGTGAAGT 27815 Query 124473 AAACGATTAATTGAAATGGCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTT 124532 ||| || | | ||||| | || || || || | | || || |||||||| || Sbjct 27816 CAACCATCA----AGATGGCAGCTGATCGCGGTGCTTTTATTGACCAGAGTCAATCATTC 27871 Query 124533 AACGTGTTTGTAGCGGAACCCACCTACGCCCGCATGACCAGCATACACATGCACGCGTGG 124592 ||| | || || ||||||| ||||| | | || ||| || | | ||||| Sbjct 27872 AACATTCACGTTGCCGAACCCAACTACGGCAAGTTAACATCCATTCATTTCTTCTCGTGG 27931 Query 124593 A--GCAGCGGACTCAAAACGGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCA 124650 | ||| || ||||| || || |||||||| | | || || || || ||| |||| | Sbjct 27932 AAGGCA--GGCCTCAAGACAGGAATGTATTATCTGCGCACAAAGCCAGCTGCCAATGCTA 27989 Query 124651 TTCAATTTACCGTCGACAAA 124670 ||||||| || ||| ||||| Sbjct 27990 TTCAATTCACAGTCAACAAA 28009 >SEQ10860 Length=7223 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || ||||| || | | ||| | |||| || || || ||||||||||| |||||| Sbjct 1454 CCACCGCGAAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAA 1513 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || ||| |||||||| || || || | ||||| || || || || || ||| Sbjct 1514 AGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGA 1573 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || |||||||| || ||||| || ||||| ||| | ||| || || | ||||| Sbjct 1574 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCAATGGTATCCGACGGTTCGACC 1633 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCG 45342 || ||||| | || || || || || ||||| || || |||||||||| Sbjct 1634 TCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCATCG 1682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451742704905800