Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_012788.1 Length=41441 Score E Sequences producing significant alignments: (Bits) Value seq963 109 1e-19 >seq963 Length=26998 Score = 109 bits (120), Expect = 1e-19 Identities = 180/257 (70%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 23974 CGACTTCGCCGCCAAGGACGGAACGCCGATCTATGCG-GCGCAGGCCGGCACCGTGGCCT 24032 ||||||||||||| ||||| || || |||| || |||| || ||||| || || Sbjct 21950 CGACTTCGCCGCCGCCGACGGCACCCCCTTCTACGCCTGCGCCGGG-GGCACAGTCCTCT 22008 Query 24033 ATATCGGGCCGGCGCAAGGCTTCGGGCAATGGATCGTGATTGACCACCCGGCCGCGGACG 24092 | ||||| || || |||| ||| || ||||| || | |||||||||| | || | Sbjct 22009 ACATCGGCCCCGCCAGCGGCTACGGTCAGTGGATTGTCCTCGACCACCCGGACAGTGAGG 22068 Query 24093 GCGCCGGCACAACTGTCTACGGGCACATGTGGAACGCGTTCGCGACCGGGCTCAAGGCCG 24152 ||| |||| || | ||||| || |||||| |||| | |||||| || || || | Sbjct 22069 GCGGCGGCGTGACCGAGTACGGCCATATGTGGGACGCCTACGCGACTGGCCTGCAGCAGG 22128 Query 24153 GCGATCGCGTCCAGGCCGGCCAACTCATTGCCTACGTCGGCGCCAACGGGCAGTCGACGG 24212 | | | || | || || || ||||| | ||||||||| | || || ||| |||| | Sbjct 22129 GGCAGTGGGTTGATGCAGGACAGCTCATCGGCTACGTCGGGTCGAATGGTCAGGCGACCG 22188 Query 24213 GCCCGCACCTGCACTTC 24229 |||||||||| ||| || Sbjct 22189 GCCCGCACCTTCACCTC 22205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132417062358030