Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 122 1e-22 seq4710 116 4e-21 seq4983 109 6e-19 >SEQ10860 Length=7223 Score = 122 bits (134), Expect = 1e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| ||||||||| ||| |||||||||||||| ||||| ||||||||| | || || Sbjct 1471 CACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTC 1530 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 | ||||||||||| || ||||| ||||| || || | || | | || |||||| Sbjct 1531 CAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTG 1590 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||| | | | || || || ||| || || | |||||||| || Sbjct 1591 AATCTTGGCTTTGACATTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTT 1650 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || |||||||| ||||||||||| Sbjct 1651 ACCCGTGAGGGTTTTAACGAAGATTTGCAT 1680 >seq4710 Length=78879 Score = 116 bits (128), Expect = 4e-21 Identities = 159/221 (72%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACT-CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCT 46436 ||||| ||||| ||||| | | |||||| ||||| |||||||| || |||||||| Sbjct 8614 ACGCAGCACCAAGTGCAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGACAGAGTGCGAC 8673 Query 46437 CGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCT 46496 | || || ||||||||||| ||||| || | |||||||| || | || | | |||| Sbjct 8674 CATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCT 8733 Query 46497 TGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| ||| | || | | || || | ||||| |||| |||| Sbjct 8734 TGTCTTGGATCTTAGCCTTCACATTCTCAATGGTATCAGATGGCTCCACCTCCAGGGTGA 8793 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||| || || ||||| || || || ||||||||||||||| Sbjct 8794 TGGTCTTTCCAGTCAGGGTCTTCACGAAGATTTGCATTTTG 8834 >seq4983 Length=3163 Score = 109 bits (120), Expect = 6e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || || || | || || | |||||| |||||||| Sbjct 679 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCTTCCAACTGCTTTCCGGCGAA 738 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| |||||||| || | || | | |||||||||| |||||| ||||| | Sbjct 739 GATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 798 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || || | || || |||| || ||||| ||||| |||| || || || Sbjct 799 CTCGATGGTATCAGAGGGCTCAACCTCCAAGGTAATGGTCTTGCCAGTCAATGTCTTTAC 858 Query 46582 AAAGATTTGCATTTT 46596 |||||| ||||| || Sbjct 859 AAAGATCTGCATATT 873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564912646044600