Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_014229.1 Length=37068 Score E Sequences producing significant alignments: (Bits) Value SEQ36899 134 3e-27 >SEQ36899 Length=3030 Score = 134 bits (148), Expect = 3e-27 Identities = 510/791 (64%), Gaps = 32/791 (4%) Strand=Plus/Minus Query 728 GGCCTTCGTGTACCGCCGTGCCCAGGTGATCATGCCCCAGAAGTCGGGCAAGGGCCCCTT 787 ||| ||| ||||||||| | ||||| || || |||||| | || ||||| || | Sbjct 2558 GGCATTCCGGTACCGCCGCGAGCAGGTCGTCGGACCGCAGAAGACAGGGAAGGGGCCGTG 2499 Query 788 TGCGGCGGCTGTTGTCCTCCTGGAGGCTGCCGGCCCGACCGTCTTTGACGGCTTCGCAGA 847 |||||| | | ||||||||| |||| | ||||||| || || ||||||| || | Sbjct 2498 GGCGGCGTCCATGGTCCTCCTGCAGGCCGTCGGCCCGTGCGAGTTCGACGGCTGGGCGCA 2439 Query 848 GGGCGGCGAGACGTACCGCTGTGCCGACTGGGGTTGCCCCTGCGGCTGGTCGTATGCGTA 907 | |||||| |||||| || | ||| || |||| ||||||||| | || ||| Sbjct 2438 CGAGGGCGAGGTGTACCGGTGCTCGGACAACGGATGCCGGTGCGGCTGGACCTACCAGTA 2379 Query 908 CGCGCCTGGCGACCCGAT-GGCCGTCCCCCAGCCCACTCCCCTGATCCAGCTCCTGGCCA 966 | ||| ||||| |||| ||||| | | | || | || ||||||||| | || | Sbjct 2378 CCTGCCCGGCGAGCCGAAAGGCCGGCGGC-ATCCGTCGCCGCTGATCCAGATGACAGCGA 2320 Query 967 CGTCCGAGGACCAGGTGGCGAACGTGTACCGCCCGCTGGTTGCCATGATCAAGCACGGTC 1026 |||||||||||||| |||| ||||| |||||| | ||||||| || | Sbjct 2319 GCAGCGAGGACCAGGTGGAGAACACCTACCGTCCGCTGCGCTCGATGATCACCATGGGGC 2260 Query 1027 ACCT--GAAGGC--CCTGATGA-----AGCCCCTGGAGGGCAT----GG-----TCAGGG 1068 || | ||| | | || | || | | |||| || || | | Sbjct 2259 CGCTGCGGTGGCTTCTCGCCGACCGCGACACCTTCGTCCGCATCCTCGGCAATCTCGGCG 2200 Query 1069 TGGGCGACGAAGGCCGCATTGACGTCGTCACGTCGTCTGCACAGAGCCGCCTGGGCAACC 1128 || || || | |||||| ||| | ||||| || || | |||||| | ||| | | Sbjct 2199 GGGACGCCGCCGACCGCATCGACATGGTCACCGCGAACGCGAACAGCCGCGTCGGCCAGC 2140 Query 1129 CCATCACTTACGCGGTCCAGGACGAGACGGGCACGTACACAGCAACCAACAAGATGATCA 1188 || | | | || ||||||||||||| || || | || | |||| | |||| Sbjct 2139 CCGTGTCCTTCGTCCTCCAGGACGAGACCGGGCTGTGGAACGCGAGCAACCGGCTGATGG 2080 Query 1189 AGGTTGCTGAGACGATGCGCCGCGGTCTGGCCGGCATGTCCGGCCGCTCCATGGAGACGA 1248 ||| || || | |||||| || || ||||||||| |||||||||||| ||||||| Sbjct 2079 CGGTCGCGGACAACCAGCGCCGTGGCCTCGCCGGCATGGGCGGCCGCTCCATCGAGACGA 2020 Query 1249 CGAACGCCTACGACCCTTCGGAGTACTCGACAGCACAGAAGACGCTGGAGGGTACCG--- 1305 ||||||||| || | | ||| || || |||| || | ||| |||| Sbjct 2019 CGAACGCCTGGAACGCCGCCGAGGCGTCCGTCGCGCAGACCACCTTCGAG---ACCGCAC 1963 Query 1306 CGGAGGACGTCTACAGGTTCTTCCCGCAGGCCCCGCCCA--CGCTGTC-CTACCGCAACA 1362 |||| || |||||| | | |||| ||| |||||| | |||| | | | | Sbjct 1962 CGGACGATGTCTACCGCTACTTC---CAGCGCCCGCCGAAGAGCTGGCGGTGGGAGAGCG 1906 Query 1363 AGGTGGAACGGCGCAGGATCCACAAGGCCGTTTACGCGGACTGCCCGCATATCGACCTTG 1422 | ||| |||||| | |||| | || ||| ||| || | |||| | ||||| | Sbjct 1905 CCGAGGACCGGCGCCGAATCCTCGAGTACGTGTACAAGGGCAGCCCCTGGGTGGACCTCG 1846 Query 1423 ACGCGATCGAAGCGGAGGCCGCGGAACTCCTGGAGTCTGACCCCGGTCAGGCGGAGCGAT 1482 || | |||||||||| ||| ||||| || |||||| | |||||| |||| | Sbjct 1845 ACTCCGTCGAAGCGGAAGCCATCGAACTGTCCAAGCGTGACCCAGACCAGGCGAAGCGCT 1786 Query 1483 TCTTCGGAAAC 1493 ||||||| ||| Sbjct 1785 TCTTCGGGAAC 1775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118431123810300