Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq133 134 5e-26 SEQ10860 129 2e-24 seq4005 122 3e-22 seq4710 98.7 4e-15 >seq133 Length=17367 Score = 134 bits (148), Expect = 5e-26 Identities = 349/532 (66%), Gaps = 14/532 (3%) Strand=Plus/Plus Query 451082 AATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGAT 451141 |||||||| ||||| || | ||||| ||||||||||||||||| | ||| ||||| | Sbjct 14241 AATGCCAAGAACACGGTTTTCGATGCGAAACGTTTAATTGGCCGCAAGTACGATGACCAG 14300 Query 451142 ACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCC 451201 | |||| | || || || ||| | || | || | || ||||| Sbjct 14301 AAGATACAGGAGGATCTCAAGCACTGGCCTTTCAAGGTCATCAACGATGGTGGCAAGCCG 14360 Query 451202 TATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCT 451261 | ||| | || | | || || ||| | ||| ||||||||| ||||| | ||| Sbjct 14361 AAAATTGAGGTCGAGTTCAAGGGGGAATCGAAACGTTTTGCTCCCGAAGAGGTCAGCTCT 14420 Query 451262 ATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGAT 451321 ||||| || || |||||| || | || || ||| | || | || | ||| Sbjct 14421 ATGGTGCTGACCAAAATGCGCGAGATCGCTGAGGTTTATCTGGGGGCCAAGGTGAAGGAT 14480 Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || || || |||||||||||||| | || || || ||||| |||||||| Sbjct 14481 GCCGTCATCACAGTGCCAGCTTATTTCAATGACTCGCAGCGTCAGGCAACCAAAGATGCC 14540 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 ||| |||||||| ||||||| || || ||||| ||||| || |||||||| ||| | Sbjct 14541 GGATCCATTGCTGGACTAAATGTGCTACGCATTATCAATGAGCCCACAGCAGCAGCTTTG 14600 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAA----GaaaaaaaTATTTTAGTATTTGA 451497 || ||||| || | | ||||| | ||| || ||| | || | || || Sbjct 14601 GCCTATGGCCTCG-------ACAAGAATCTGAAAGGCGAGCGCAATGTGTTGATCTTCGA 14653 Query 451498 TTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGA 451554 ||| ||||| || || |||| || |||| | ||||| || || | | || || Sbjct 14654 TTTGGGTGGCGGCACCTTTGATGTGTCCATACTCACCATTGACGAGGGCTCGCTGTTCGA 14713 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 || ||||| || || ||||| ||||| || || || || |||| ||| Sbjct 14714 GGTGAAGGCCACAGCCGGCGATACACATCTGGGTGGCGAGGACTTTGACAAT 14765 >SEQ10860 Length=7223 Score = 129 bits (142), Expect = 2e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||||||||| || || ||||| || || |||||||| || ||| | || Sbjct 1680 ATGCAAATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCG 1621 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||||| | | ||| || ||||| || || |||||||||||||| |||||| Sbjct 1620 GATACCATTGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAA 1561 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || || | || || ||| | |||||||| | ||| | | ||||| ||| Sbjct 1560 CAGCGTTTGATCTTTGCCGGCAAGCAATTGGAAGATGGGCGCACTCTTTCCGATTACAAT 1501 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || | ||| | ||||| || Sbjct 1500 ATCCAAAAAGAGTCTACATTGCACTTGGT 1472 >seq4005 Length=24450 Score = 122 bits (134), Expect = 3e-22 Identities = 249/367 (68%), Gaps = 5/367 (1%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || || ||| | || || ||||| || || ||||||||||| || || || |||| | Sbjct 23899 CCAGAGGAAGTCTCCTCGATGGTGCTCACCAAAATGAAAGAGACCGCCGAGGCATATCTG 23958 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 ||| || || ||||| || | || || ||||| ||||||||||| | ||||| Sbjct 23959 GGTGGCGTTGTCACCGATGCCGTTGTCACGGTGCCCGCCTATTTCAATGACTCTCAACGC 24018 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || || || ||||| || ||||| || | ||||| || || || || || ||| Sbjct 24019 CAGGCGACCAAGGATGCGGGCGCCATTGCCGGACTCAATGTGCTGCGCATCATCAACGAA 24078 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCA--AAAGAAACA--GAAGaaaa 451479 || ||||| || || | || ||||| || ||| || || | || | || | || Sbjct 24079 CCGACAGCGGCAGCCATTGCCTATGGCCT-GGACAAGCAGGACAGCAGCAAGGGGGAGCG 24137 Query 451480 aaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGA 451539 ||| | | | |||||||| || || || ||| ||| || || || | ||||| Sbjct 24138 TAATGTGCTCATTTTTGATTTGGGCGGCGGCACTTTCGATGTCTCGGTGCTCACCATTGA 24197 Query 451540 AGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATAT 451599 ||||| | ||||| || ||||| ||| || || || ||||| || |||||||| || Sbjct 24198 GGATGGCATCTTTGAGGTGAAGGCCACCGCCGGCGACACGCATCTGGGCGGTGAAGACAT 24257 Query 451600 TGATAAT 451606 || ||| Sbjct 24258 CGACAAT 24264 >seq4710 Length=78879 Score = 98.7 bits (108), Expect = 4e-15 Identities = 149/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||||||| || || || || || || || || |||| Sbjct 8831 AATGCAAATCTTCGTGAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTGGAGCCATC 8772 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | | || || || ||||| ||||||||||| || || ||||| Sbjct 8771 TGATACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAAGGAATCCCCCCAGATCA 8712 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || ||| | || || || || || ||||| | ||| || | || || || Sbjct 8711 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCAGACTACAA 8652 Query 391229 TATTGATAAGGATGCAACACTT-CACTTAGT 391258 || | ||||| | || ||| ||||| || Sbjct 8651 CATCCAGAAGGAGTCGACCCTTGCACTTGGT 8621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974551303009340