Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq133 105 5e-17
seq2972 98.7 8e-15
>seq133
Length=17367
Score = 105 bits (116), Expect = 5e-17
Identities = 118/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 518555 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 518614
|||| || || || || ||||||||| | || || || | || | |||||||||||||
Sbjct 13958 TGATTCTTTGCGGCGTCGCCAATCAGACGCTCAGTTTCGTTGAAGGCAACATATGATGGA 13899
Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 518674
||||||||||| || ||||| || || || || || ||||| || ||||| |||||
Sbjct 13898 GTTGTGCGATTGCCCTGATCGTTGGCTATGATCTCCACTTTGTTGTTCTGCCAGACACCC 13839
Query 518675 ACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712
||||| | | ||||| || | ||| || ||||||||
Sbjct 13838 ACACAGGAATATGTTGTGCCCAGATCGATGCCAATAGC 13801
Score = 93.3 bits (102), Expect = 3e-13
Identities = 201/299 (67%), Gaps = 9/299 (3%)
Strand=Plus/Minus
Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074
||||||||||| ||||| || || || |||| | |||| || | || || | ||
Sbjct 14773 ACAAGACGATTGTCAAAGTCCTCGCCACCCAGATGTGTATCGCCGGCTGTGGCCTTCACC 14714
Query 518075 TGGAAAAG---TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATA 518131
| ||| || || || |||| | | | | |||||| ||| || ||||||| |
Sbjct 14713 TCGAACAGCGAGCCCTCGTCAATGGTGAGTATGGACACATCAAAGGTGCCGCCACCCAAA 14654
Query 518132 TCAAAAATAAGTACATTCATTTCTTTGTCTT---GGTTTTTATCAAGACCATACGCAAAA 518188
|| || || | ||||| || | ||| | || || || || ||||| || |||
Sbjct 14653 TCGAAGATCAACACATTGCGCTC---GCCTTTCAGATTCTTGTCGAGGCCATAGGCCAAA 14597
Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248
|| || || || || ||||| ||||| | | ||||| || |||||||| ||| |||
Sbjct 14596 GCTGCTGCTGTGGGCTCATTGATAATGCGTAGCACATTTAGTCCAGCAATGGATCCGGCA 14537
Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 518307
||||| || || || | || || || || ||||| || || || || || ||||||||
Sbjct 14536 TCTTTGGTTGCCTGACGCTGCGAGTCATTGAAATAAGCTGGCACTGTGATGACGGCATC 14478
>seq2972
Length=6305
Score = 98.7 bits (108), Expect = 8e-15
Identities = 205/303 (68%), Gaps = 2/303 (1%)
Strand=Plus/Minus
Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303
||||| || || || ||| ||||||| | ||| ||||| ||||| | |||||||| ||
Sbjct 343 GTTGACTTCTCCGCTGCACTCACATTCAAAATGCCATTCGCATCAATGTCAAATGTAACC 284
Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 517363
|| ||||| || || || | | |||| || || || | ||| | |||| | |||| |
Sbjct 283 TCGATTTGGGGCACGCCACGCGGAGCCGGCGGAATGGCGGACAACTCAAATTTACCCAAA 224
Query 517364 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 517423
|||| ||||| || || | ||||||||||| || | ||||| || | |
Sbjct 223 ATATTGTTATCCTTGGTCATAGCACGTTCACCCTCAAACACCTGGATGAGCACACCGGGC 164
Query 517424 TGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCT 517482
|||||||| | ||| || ||||| | |||| | | || || || || | ||| |
Sbjct 163 TGATTATCGGCATACGTGGTAAAGA-TCTGCGTCTGCTTGGTGGGTATGGTCGAGTTACG 105
Query 517483 ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 517542
| ||| | | ||||| | ||| || ||||| || | || || || || ||||| ||
Sbjct 104 TTTAATCAGCGTTGTCATCACACCGCCAGCTGTCTCAATGCCCAGCGACAGTGGAGTCAC 45
Query 517543 ATC 517545
|||
Sbjct 44 ATC 42
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3778534518030130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |