Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq61 156 5e-33 seq735 82.4 9e-11 >seq61 Length=55249 Score = 156 bits (172), Expect = 5e-33 Identities = 590/912 (65%), Gaps = 23/912 (3%) Strand=Plus/Plus Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145 || |||||||||| ||| | ||||| || ||||| || |||||| | || |||| | | Sbjct 26723 CGTGATCTCTTCTACGCCTTGTGGATACCCGATCTGTTTATGAAGCGTGTGGAGGCCAAT 26782 Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT---GGGT 112202 | ||||||| || || ||||| ||||| ||||| || || | ||| ||| Sbjct 26783 GAGGATTGGTCGCTGTTGTGTCCTCACAAGTGTCCCGG---CTTGGAAGACGTTTGGGGG 26839 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTG 112262 || || ||||| || || |||||||||||| || |||| || | | | | Sbjct 26840 GATGACTTTGAGAAGCTGTATACAAAGTACGAGAGCGAGGGTCGCGCAAATCGTGTGATT 26899 Query 112263 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 ||| | | ||| | || ||| | | |||||| |||||||| || || || Sbjct 26900 AAAGCACAAACTCTTTGGTATGCCATTGTTGAATCTCAAGTTGAGACTGGCACTCCGTAC 26959 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||||| | ||| ||| | || ||| ||||| ||||| ||||| | || ||||| Sbjct 26960 ATGCTCTTCAAGGACTCTTGCAACAGGAAGAGCAATCAGCAGAATGTTGGCACCATCAAA 27019 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 | ||||||||| || ||||| | |||| | | | ||||||| || || || Sbjct 27020 TGCAGCAACCTCTGCACTGAAATTGTTGAATATTCGGCACCCGATGAGATTGCCGTCTGC 27079 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTAT 112502 || | ||||| || || | | || |||| | |||||| || |||| |||| Sbjct 27080 AATTTGGCATCGATAGCCTTGAATATGTTTGTGACTTCAGAGAAAA---CATTCGATTTC 27136 Query 112503 GAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGA 112562 | ||||| | |||||||| ||||||||||| | ||| | |||| | | ||||||| Sbjct 27137 AAGAAACTGAAGGAAGTTACTAAAACTGTCACCAGAAATTTGAACAAAATCATTGATATC 27196 Query 112563 AATTTTTACCCCGTTG--AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 112620 |||| || ||| || || || ||||| ||| | ||||| ||||| ||||| Sbjct 27197 AATTACTA-TCCGCTGCCCGA-GGCAAAGAAATCCAATTTAAGACATCGTCCCATTGGCA 27254 Query 112621 TCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACG 112680 | || || || || | || || | || ||||| || | | ||| ||| Sbjct 27255 TTGGCGTTCAGGGCTTTGCCGACGCCTTAATTCTGATGCGTTTTCCCTATGAGAGTGACA 27314 Query 112681 AAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGA 112740 |||| ||||| || || || || || || || | | || |||||||| | Sbjct 27315 AAGCCGTATTGCTCAATCAGCAGATCTTCGAAACCATCTACTATGGTGCCCTTGAGGCCA 27374 Query 112741 GTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCAC 112800 ||| ||| |||| | || ||||| |||||||||| | |||| ||| | | | Sbjct 27375 GTTGTGAGCTGGCTCAAAAGGACGGTCCCTATGAAACCTACGCTGGTTGTCC-GGTGAGC 27433 Query 112801 AAGGG-GTGCTTCAATTTGATATGTGGGA-AGGTGAGAC-CAAGCTTCACTACGACTGGG 112857 ||||| | || || | ||||||||||| | | | | ||||| | | || ||| Sbjct 27434 AAGGGAATTCTGCAGTACGATATGTGGGACAAGACACCCACAAGC--CTTTGGGATTGGA 27491 Query 112858 ACGCTCTCAA--GGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915 ||||| || ||| ||||| ||| | || || | ||| || | | || || Sbjct 27492 CTGCTCTAAAATTGAA--AATCAAAGAGCATGGCGTTAGAAACTCGCTGCTTGTAGCTCC 27549 Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 |||||| || || || || || || ||| ||||||||||||| | |||||| || || || Sbjct 27550 AATGCCCACGGCATCTACTGCCCAGATCATGGGTAATAATGAGTCCTTTGAGCCGTATAC 27609 Query 112976 GACGAACATCTA 112987 | ||||| || Sbjct 27610 TTCAAACATTTA 27621 >seq735 Length=17191 Score = 82.4 bits (90), Expect = 9e-11 Identities = 168/247 (68%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 176020 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 176079 ||| || ||||| ||||||| ||||| || ||||| | ||||| | | ||| || || Sbjct 11630 ATCTTTTCCACCGGTGAGACGAGTACCGAATTGACCGCGTGGCTCTAACAAATTAATGTT 11571 Query 176080 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTG-TCCGCGAGAGAGACTTCAC 176138 ||| || |||| |||| | |||||| || ||||| || | || || |||||||||| Sbjct 11570 GTTCGATCCCACATAGTTCTGCGCCAAATTCACAATGGTCATTTGC-AGCGAGACTTCAC 11512 Query 176139 CGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCAT 176198 | || || |||| | | || || || | ||| || ||| || || || | ||| Sbjct 11511 CATGATGATACGATGACATTTCGGCAACGGAACCCGACAGCTGGGCAACCTTAACTTCAC 11452 Query 176199 CCTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCAT 176258 |||| ||| | ||||| | |||||||||| || || |||||| | |||| Sbjct 11451 GCTTGTCATTACGCTTAAAACACGTAAACATAACCTTCCGCTGACCAGGCTTTAAGCCAT 11392 Query 176259 CCGCCAT 176265 | |||| Sbjct 11391 CTACCAT 11385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620384658395600