Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq61 156 5e-33
seq735 82.4 9e-11
>seq61
Length=55249
Score = 156 bits (172), Expect = 5e-33
Identities = 590/912 (65%), Gaps = 23/912 (3%)
Strand=Plus/Plus
Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145
|| |||||||||| ||| | ||||| || ||||| || |||||| | || |||| | |
Sbjct 26723 CGTGATCTCTTCTACGCCTTGTGGATACCCGATCTGTTTATGAAGCGTGTGGAGGCCAAT 26782
Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT---GGGT 112202
| ||||||| || || ||||| ||||| ||||| || || | ||| |||
Sbjct 26783 GAGGATTGGTCGCTGTTGTGTCCTCACAAGTGTCCCGG---CTTGGAAGACGTTTGGGGG 26839
Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTG 112262
|| || ||||| || || |||||||||||| || |||| || | | | |
Sbjct 26840 GATGACTTTGAGAAGCTGTATACAAAGTACGAGAGCGAGGGTCGCGCAAATCGTGTGATT 26899
Query 112263 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322
||| | | ||| | || ||| | | |||||| |||||||| || || ||
Sbjct 26900 AAAGCACAAACTCTTTGGTATGCCATTGTTGAATCTCAAGTTGAGACTGGCACTCCGTAC 26959
Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382
||||| | ||| ||| | || ||| ||||| ||||| ||||| | || |||||
Sbjct 26960 ATGCTCTTCAAGGACTCTTGCAACAGGAAGAGCAATCAGCAGAATGTTGGCACCATCAAA 27019
Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442
| ||||||||| || ||||| | |||| | | | ||||||| || || ||
Sbjct 27020 TGCAGCAACCTCTGCACTGAAATTGTTGAATATTCGGCACCCGATGAGATTGCCGTCTGC 27079
Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTAT 112502
|| | ||||| || || | | || |||| | |||||| || |||| ||||
Sbjct 27080 AATTTGGCATCGATAGCCTTGAATATGTTTGTGACTTCAGAGAAAA---CATTCGATTTC 27136
Query 112503 GAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGA 112562
| ||||| | |||||||| ||||||||||| | ||| | |||| | | |||||||
Sbjct 27137 AAGAAACTGAAGGAAGTTACTAAAACTGTCACCAGAAATTTGAACAAAATCATTGATATC 27196
Query 112563 AATTTTTACCCCGTTG--AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 112620
|||| || ||| || || || ||||| ||| | ||||| ||||| |||||
Sbjct 27197 AATTACTA-TCCGCTGCCCGA-GGCAAAGAAATCCAATTTAAGACATCGTCCCATTGGCA 27254
Query 112621 TCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACG 112680
| || || || || | || || | || ||||| || | | ||| |||
Sbjct 27255 TTGGCGTTCAGGGCTTTGCCGACGCCTTAATTCTGATGCGTTTTCCCTATGAGAGTGACA 27314
Query 112681 AAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGA 112740
|||| ||||| || || || || || || || | | || |||||||| |
Sbjct 27315 AAGCCGTATTGCTCAATCAGCAGATCTTCGAAACCATCTACTATGGTGCCCTTGAGGCCA 27374
Query 112741 GTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCAC 112800
||| ||| |||| | || ||||| |||||||||| | |||| ||| | | |
Sbjct 27375 GTTGTGAGCTGGCTCAAAAGGACGGTCCCTATGAAACCTACGCTGGTTGTCC-GGTGAGC 27433
Query 112801 AAGGG-GTGCTTCAATTTGATATGTGGGA-AGGTGAGAC-CAAGCTTCACTACGACTGGG 112857
||||| | || || | ||||||||||| | | | | ||||| | | || |||
Sbjct 27434 AAGGGAATTCTGCAGTACGATATGTGGGACAAGACACCCACAAGC--CTTTGGGATTGGA 27491
Query 112858 ACGCTCTCAA--GGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915
||||| || ||| ||||| ||| | || || | ||| || | | || ||
Sbjct 27492 CTGCTCTAAAATTGAA--AATCAAAGAGCATGGCGTTAGAAACTCGCTGCTTGTAGCTCC 27549
Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975
|||||| || || || || || || ||| ||||||||||||| | |||||| || || ||
Sbjct 27550 AATGCCCACGGCATCTACTGCCCAGATCATGGGTAATAATGAGTCCTTTGAGCCGTATAC 27609
Query 112976 GACGAACATCTA 112987
| ||||| ||
Sbjct 27610 TTCAAACATTTA 27621
>seq735
Length=17191
Score = 82.4 bits (90), Expect = 9e-11
Identities = 168/247 (68%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 176020 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 176079
||| || ||||| ||||||| ||||| || ||||| | ||||| | | ||| || ||
Sbjct 11630 ATCTTTTCCACCGGTGAGACGAGTACCGAATTGACCGCGTGGCTCTAACAAATTAATGTT 11571
Query 176080 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTG-TCCGCGAGAGAGACTTCAC 176138
||| || |||| |||| | |||||| || ||||| || | || || ||||||||||
Sbjct 11570 GTTCGATCCCACATAGTTCTGCGCCAAATTCACAATGGTCATTTGC-AGCGAGACTTCAC 11512
Query 176139 CGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCAT 176198
| || || |||| | | || || || | ||| || ||| || || || | |||
Sbjct 11511 CATGATGATACGATGACATTTCGGCAACGGAACCCGACAGCTGGGCAACCTTAACTTCAC 11452
Query 176199 CCTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCAT 176258
|||| ||| | ||||| | |||||||||| || || |||||| | ||||
Sbjct 11451 GCTTGTCATTACGCTTAAAACACGTAAACATAACCTTCCGCTGACCAGGCTTTAAGCCAT 11392
Query 176259 CCGCCAT 176265
| ||||
Sbjct 11391 CTACCAT 11385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620384658395600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |