Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2872 125 8e-24 >seq2872 Length=9359 Score = 125 bits (138), Expect = 8e-24 Identities = 527/815 (65%), Gaps = 23/815 (3%) Strand=Plus/Plus Query 119207 ATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCAT 119266 ||| |||||||| |||| |||||||| || || || ||||| | ||||| | ||||| Sbjct 2992 ATATTCACCCACTTTCTTCTCGAAGAAGTTGGTTTTGCCATCCAAAGAGATCATCTCCAT 3051 Query 119267 AAAGTCAAAAGGATTTTTGGAGTTCCAGATTGGTGGTTGAC--CAACTTGTTTCAGAAGA 119324 || || ||||| || | ||| | || | | || ||| | || || Sbjct 3052 GAACGAGAATGGATTCTTTGTGTTGTAAATC--TTGCCCACTCCAAGCTCAACCAATAGG 3109 Query 119325 CGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTA 119384 ||||| | |||| |||||||||||||||||||| | | ||||| || || | || Sbjct 3110 CGATCAGCGACAAACTCGATATATTCGGACATCAGAGCACAGTTCATGCCAATCAAGTTG 3169 Query 119385 CACGGG-AGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGG- 119442 ||||| || |||||| || ||| | || ||| || |||||| || | | ||| Sbjct 3170 -ACGGGCAGCGCATCGGTGAGGAACTCCTGCTCAATAGTCACAGCATCCGTTATGATTTC 3228 Query 119443 AGTGAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACGGCAAATT 119502 | ||| ||| | | | | || | ||| ||| |||| || ||||| | Sbjct 3229 AATGATGCGTTCCCGACTA-GGCCGCTGCACCAAATGTTGGAACATAAGCACCGCAAAGT 3287 Query 119503 CTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGA 119562 | ||| || |||||||| |||||||| | || || ||| |||||||||||| | Sbjct 3288 CACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAATGTAAGTCCAGGCATAA 3347 Query 119563 GTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCA 119622 |||| | ||||| ||||| ||||||| ||| || ||| ||||||||||| || | Sbjct 3348 GTCCACGCTTCTTCAGCCAGAAGATGGATGCAAAGCTCCCACTGAAGAAGATGCCTTCAA 3407 Query 119623 CACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCG-AGACTTGTCGAA-----CCACT 119676 || || ||||| | | ||| ||| | |||| | | || || ||||| ||| Sbjct 3408 CAGCAGCAAAAGCAATAATACGTTCA-CCAAAGTTGGCAGCCT--TCGAAGAGATCCAAG 3464 Query 119677 TGAGAGCCCAGTTGGCCTTACGCTCTATGCAG--GGGACAGTTTGGATGGCTTCGAAAAG 119734 |||||||||| ||||| |||| || ||| || | |||| ||||| | ||| || Sbjct 3465 AAAGAGCCCAGTCTGCCTTCCGCT-TA-ACAGCCGGCATCGTTTCAATGGCATTGAAGAG 3522 Query 119735 TTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACC 119794 | | | | | |||| | ||||| | |||||||| | ||| | || Sbjct 3523 ATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACACTGTACATTTCGGA 3582 Query 119795 ATGAACCATTTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCAC 119854 ||| || | || || ||| || ||||||| | || || |||| | ||||| Sbjct 3583 ATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCGGTCACCTGCAC 3642 Query 119855 TTCGTCAGCAAAATTGTT-GTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGA 119913 ||| | || ||| ||| | | |||||| |||||||||||| || |||| |||| Sbjct 3643 TTC-TTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCAGAAGCAGCAAAGA 3701 Query 119914 ATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAGTGTTTTCCAGTCGTCCA 119973 | || || | | | |||||| | | |||||||| | || | ||| || || Sbjct 3702 AGGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTGGCCCAATCAGTCA 3761 Query 119974 TATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAG 120008 | || || |||| ||||| ||||| | |||||| Sbjct 3762 TGTCCTTGGACAGATCCACTTCTTCGACGGTCCAG 3796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588636565769000