Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq61 114 2e-20 seq735 91.5 2e-13 >seq61 Length=55249 Score = 114 bits (126), Expect = 2e-20 Identities = 576/909 (63%), Gaps = 23/909 (3%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | || || || |||||| | ||||||||||||| ||| || || || || Sbjct 27621 TAAATGTTTGAAGTATACGGCTCAAAGGACTCATTATTACCCATGATCTGGGCAGTAGAT 27562 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || |||||||| || | | || ||| | || || | || ||||| ||| Sbjct 27561 GCCGTGGGCATTGGAGCTACAAGCAGCGAGTTTCTAACGCCATGCTCTTTGATT--TTCA 27504 Query 106055 --TTGAGAACATCCCAGTCGTAGTTGAGCTTG-GTTTCACCT-TCCCACATATCAAATTG 106110 || ||| || ||| || | | |||| | | | | ||||||||||| | || Sbjct 27503 ATTTTAGAGCAGTCCAATCCCAAAGG--CTTGTGGGTGTCTTGTCCCACATATCGTACTG 27446 Query 106111 AAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGC 106170 || | || | | | ||| |||| | | || ||||||| ||| | || ||| Sbjct 27445 CAGAATTCCCTTGCTCACCGGACAACCAGCGTAGGTTTCATAGGGACCGTCCTTTTGAGC 27386 Query 106171 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 106230 || ||||| || ||||| |||| | | || |||||||| ||||| | ||| | Sbjct 27385 CAGCTCACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGAAGATCTGCTGATTGAG 27326 Query 106231 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 106290 | ||||| || ||| | | | || || ||| || | || || | || Sbjct 27325 CAATACGGCTTTGTCACTCTCATAGGGAAAACGCATCAGAATTAAGGCGTCGGCAAAGCC 27266 Query 106291 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA---CTTTCGCGCAGTCTCAAC 106347 ||||| || | ||||| || | |||| | ||| || |||| | | | | | Sbjct 27265 CTGAACGCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCTTTGCCTCGGGC---AG 27209 Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407 ||||| |||| | ||||||| | ||| | |||| |||| ||| | || || | ||| Sbjct 27208 CGGATAGTAATTGATATCAATGATTTTGTTCAAATTTCTGGTGACAGTTTTAGTAACTTC 27149 Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 106467 | ||||| | |||| || || ||||| | | ||| || | | ||| || Sbjct 27148 CTTCAGTTTCTTGAAATCGAATGTTT---TCTCTGAAGTCACAAACATATTCAAGGCTAT 27092 Query 106468 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 106527 |||||||||||||| || || ||||||| | | || || | |||||| || || Sbjct 27091 CGATGCCAAATTGCAGACGGCAATCTCATCGGGTGCCGAATATTCAACAATTTCAGTGCA 27032 Query 106528 CAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATC 106587 | |||| | || || || || | ||||| || || ||||| ||||||| | || Sbjct 27031 GAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGTC 26972 Query 106588 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647 |||| |||||||||| || || || ||||| || || | | ||| || | ||| | Sbjct 26971 CTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAAG 26912 Query 106648 ATCGGCGGCTGGTACAATGGC---GTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704 | | || | ||| | || || || ||||| |||||||||||| || || Sbjct 26911 A---GTTTGTGCTTTAATCACACGATTTGCGCGACCCTCGCTCTCGTACTTTGTATACAG 26855 Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764 ||||| || || ||| |||| | || || ||||| ||||| || || Sbjct 26854 CTTCTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAG 26795 Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 106824 ||||| | || |||| || |||||||| || || || || ||||||| || | Sbjct 26794 CGACCAATCCTCATTGGCCTCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTA 26735 Query 106825 AAAGAGATC 106833 |||||||| Sbjct 26734 GAAGAGATC 26726 >seq735 Length=17191 Score = 91.5 bits (100), Expect = 2e-13 Identities = 173/251 (69%), Gaps = 8/251 (3%) Strand=Plus/Minus Query 168470 ATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTT 168529 ||| || ||||| ||||||| ||||| |||||||| | || || | | |||||||| Sbjct 11630 ATCTTTTCCACCGGTGAGACGAGTACCGAATTGACCGCGTGGCTCTAACAAATTAATGTT 11571 Query 168530 GTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGT-GTCCGCTAAGGATACTTCAC 168588 ||| || ||| |||| | ||||| || ||||| || | || | || ||||||| Sbjct 11570 GTTCGATCCCACATAGTTCTGCGCCAAATTCACAATGGTCATTTGC-AGCGAGACTTCAC 11512 Query 168589 CATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTCAT 168648 |||| || |||| ||| | || || || | ||| ||| || || ||||| | |||| Sbjct 11511 CATGATGATACGATGACATTTCGGCAACGGAACCCGACAGCTGGGCAACCTTAACTTCAC 11452 Query 168649 CCTTGAGATT---CTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGAC 168705 |||| ||| |||| || || | | |||| || |||| ||| |||||| | | Sbjct 11451 GCTTGTCATTACGCTTA---AAACACGTAAACATAACCTTCCGCTGACCAGGCTTTAAGC 11395 Query 168706 CATCCGCCATA 168716 |||| ||||| Sbjct 11394 CATCTACCATA 11384 Score = 89.7 bits (98), Expect = 6e-13 Identities = 236/354 (67%), Gaps = 11/354 (3%) Strand=Plus/Minus Query 169185 CCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAGCGA 169244 || || |||||||||||||| | ||| ||| ||||| ||||| | ||||||||| Sbjct 10821 CCTTTAATGTGAGAACCATCCTGATCCTGATCAGTCATGATCATTACTTTACCATAGCGC 10762 Query 169245 AGT---TCAGAAACATCT-TGGT---AGTCTTTTCCTTGT--TGAAGACCCAAGATCTTC 169295 ||| | || |||| |||| | ||| | || | || | || | || || Sbjct 10761 AGTGTCTTTAAATCATCCATGGTTAAATACTTCTTTTTATACTGCAATCCAATAATTTTG 10702 Query 169296 TTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACATTC 169355 ||| | ||||| ||| ||| || |||||| | ||| || ||||| || || Sbjct 10701 CAGAGGTTGTTGATCTCAGCGTTCTCGGTTAGCTGTTTGAATGATGCTTCGCGCACGTT- 10643 Query 169356 TTACACTTC-CCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACC 169414 | ||| || || || || |||||||||||||| | | || |||| ||| || || Sbjct 10642 TAACAATTTACCGCGCAGTGGAAAGACGCCATAATAGTTGCGACCAATGACACCTAGGCC 10583 Query 169415 CGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTTTCCAGA 169474 | ||| || | | ||| ||||| || ||||| |||| || || ||||| || || Sbjct 10582 AGAGACAGCTAAAGATTTGGCTGAGTCTCCCTCGGTGAGGATAAGAGTACAATTCAATGA 10523 Query 169475 TTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCAGTAATTTT 169528 | | || ||||||| ||| || || |||||||||||||| || | ||||| Sbjct 10522 ATTCTTTGTGCCCGCCTCGTTGGCATCTTCCAACTTGGGAATTCCCTTGATTTT 10469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589640786690200