Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq61 114 2e-20
seq735 91.5 2e-13
>seq61
Length=55249
Score = 114 bits (126), Expect = 2e-20
Identities = 576/909 (63%), Gaps = 23/909 (3%)
Strand=Plus/Minus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|| ||||| | || || || |||||| | ||||||||||||| ||| || || || ||
Sbjct 27621 TAAATGTTTGAAGTATACGGCTCAAAGGACTCATTATTACCCATGATCTGGGCAGTAGAT 27562
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054
|| || |||||||| || | | || ||| | || || | || ||||| |||
Sbjct 27561 GCCGTGGGCATTGGAGCTACAAGCAGCGAGTTTCTAACGCCATGCTCTTTGATT--TTCA 27504
Query 106055 --TTGAGAACATCCCAGTCGTAGTTGAGCTTG-GTTTCACCT-TCCCACATATCAAATTG 106110
|| ||| || ||| || | | |||| | | | | ||||||||||| | ||
Sbjct 27503 ATTTTAGAGCAGTCCAATCCCAAAGG--CTTGTGGGTGTCTTGTCCCACATATCGTACTG 27446
Query 106111 AAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGC 106170
|| | || | | | ||| |||| | | || ||||||| ||| | || |||
Sbjct 27445 CAGAATTCCCTTGCTCACCGGACAACCAGCGTAGGTTTCATAGGGACCGTCCTTTTGAGC 27386
Query 106171 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 106230
|| ||||| || ||||| |||| | | || |||||||| ||||| | ||| |
Sbjct 27385 CAGCTCACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGAAGATCTGCTGATTGAG 27326
Query 106231 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 106290
| ||||| || ||| | | | || || ||| || | || || | ||
Sbjct 27325 CAATACGGCTTTGTCACTCTCATAGGGAAAACGCATCAGAATTAAGGCGTCGGCAAAGCC 27266
Query 106291 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA---CTTTCGCGCAGTCTCAAC 106347
||||| || | ||||| || | |||| | ||| || |||| | | | | |
Sbjct 27265 CTGAACGCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCTTTGCCTCGGGC---AG 27209
Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407
||||| |||| | ||||||| | ||| | |||| |||| ||| | || || | |||
Sbjct 27208 CGGATAGTAATTGATATCAATGATTTTGTTCAAATTTCTGGTGACAGTTTTAGTAACTTC 27149
Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 106467
| ||||| | |||| || || ||||| | | ||| || | | ||| ||
Sbjct 27148 CTTCAGTTTCTTGAAATCGAATGTTT---TCTCTGAAGTCACAAACATATTCAAGGCTAT 27092
Query 106468 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 106527
|||||||||||||| || || ||||||| | | || || | |||||| || ||
Sbjct 27091 CGATGCCAAATTGCAGACGGCAATCTCATCGGGTGCCGAATATTCAACAATTTCAGTGCA 27032
Query 106528 CAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATC 106587
| |||| | || || || || | ||||| || || ||||| ||||||| | ||
Sbjct 27031 GAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGTC 26972
Query 106588 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647
|||| |||||||||| || || || ||||| || || | | ||| || | ||| |
Sbjct 26971 CTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAAG 26912
Query 106648 ATCGGCGGCTGGTACAATGGC---GTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704
| | || | ||| | || || || ||||| |||||||||||| || ||
Sbjct 26911 A---GTTTGTGCTTTAATCACACGATTTGCGCGACCCTCGCTCTCGTACTTTGTATACAG 26855
Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764
||||| || || ||| |||| | || || ||||| ||||| || ||
Sbjct 26854 CTTCTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAG 26795
Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 106824
||||| | || |||| || |||||||| || || || || ||||||| || |
Sbjct 26794 CGACCAATCCTCATTGGCCTCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTA 26735
Query 106825 AAAGAGATC 106833
||||||||
Sbjct 26734 GAAGAGATC 26726
>seq735
Length=17191
Score = 91.5 bits (100), Expect = 2e-13
Identities = 173/251 (69%), Gaps = 8/251 (3%)
Strand=Plus/Minus
Query 168470 ATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTT 168529
||| || ||||| ||||||| ||||| |||||||| | || || | | ||||||||
Sbjct 11630 ATCTTTTCCACCGGTGAGACGAGTACCGAATTGACCGCGTGGCTCTAACAAATTAATGTT 11571
Query 168530 GTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGT-GTCCGCTAAGGATACTTCAC 168588
||| || ||| |||| | ||||| || ||||| || | || | || |||||||
Sbjct 11570 GTTCGATCCCACATAGTTCTGCGCCAAATTCACAATGGTCATTTGC-AGCGAGACTTCAC 11512
Query 168589 CATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTCAT 168648
|||| || |||| ||| | || || || | ||| ||| || || ||||| | ||||
Sbjct 11511 CATGATGATACGATGACATTTCGGCAACGGAACCCGACAGCTGGGCAACCTTAACTTCAC 11452
Query 168649 CCTTGAGATT---CTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGAC 168705
|||| ||| |||| || || | | |||| || |||| ||| |||||| | |
Sbjct 11451 GCTTGTCATTACGCTTA---AAACACGTAAACATAACCTTCCGCTGACCAGGCTTTAAGC 11395
Query 168706 CATCCGCCATA 168716
|||| |||||
Sbjct 11394 CATCTACCATA 11384
Score = 89.7 bits (98), Expect = 6e-13
Identities = 236/354 (67%), Gaps = 11/354 (3%)
Strand=Plus/Minus
Query 169185 CCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAGCGA 169244
|| || |||||||||||||| | ||| ||| ||||| ||||| | |||||||||
Sbjct 10821 CCTTTAATGTGAGAACCATCCTGATCCTGATCAGTCATGATCATTACTTTACCATAGCGC 10762
Query 169245 AGT---TCAGAAACATCT-TGGT---AGTCTTTTCCTTGT--TGAAGACCCAAGATCTTC 169295
||| | || |||| |||| | ||| | || | || | || | || ||
Sbjct 10761 AGTGTCTTTAAATCATCCATGGTTAAATACTTCTTTTTATACTGCAATCCAATAATTTTG 10702
Query 169296 TTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACATTC 169355
||| | ||||| ||| ||| || |||||| | ||| || ||||| || ||
Sbjct 10701 CAGAGGTTGTTGATCTCAGCGTTCTCGGTTAGCTGTTTGAATGATGCTTCGCGCACGTT- 10643
Query 169356 TTACACTTC-CCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACC 169414
| ||| || || || || |||||||||||||| | | || |||| ||| || ||
Sbjct 10642 TAACAATTTACCGCGCAGTGGAAAGACGCCATAATAGTTGCGACCAATGACACCTAGGCC 10583
Query 169415 CGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTTTCCAGA 169474
| ||| || | | ||| ||||| || ||||| |||| || || ||||| || ||
Sbjct 10582 AGAGACAGCTAAAGATTTGGCTGAGTCTCCCTCGGTGAGGATAAGAGTACAATTCAATGA 10523
Query 169475 TTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCAGTAATTTT 169528
| | || ||||||| ||| || || |||||||||||||| || | |||||
Sbjct 10522 ATTCTTTGTGCCCGCCTCGTTGGCATCTTCCAACTTGGGAATTCCCTTGATTTT 10469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589640786690200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |