Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1590 89.7 6e-13 >seq1590 Length=6779 Score = 89.7 bits (98), Expect = 6e-13 Identities = 169/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 154860 GAACTGTCATGTATTATGATTACATACCCATCTACACATGGT-GTATTTGAAACTAACAT 154918 ||| | || ||| | |||||||| |||||||| || ||||| || || ||| | | | Sbjct 1237 GAATTATCGTGTTTGATGATTACGTACCCATCCAC-CATGGGCGTGTTCGAAGAGACCGT 1179 Query 154919 TAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAA 154978 | | || || | | || |||| ||||||||||||| ||| | || || || || Sbjct 1178 TGCGGACATCTGCGCGTTGGTCCATGCTCATGGTGGTCAGGTCTATTTAGACGGTGCTAA 1119 Query 154979 TCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCT 155038 | | ||||| || || || || |||| |||| || || ||||| | ||||| Sbjct 1118 TATGAATGCTCAAGTGGGTCTGTGCCGACCAGGTGACTACGGCAGCGATGTGTCACATCT 1059 Query 155039 AAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098 || ||||||| || ||||| ||||||||||| || || || || ||| | || || || Sbjct 1058 GAATCTACATAAGACCTTCTGCATTCCACATGGCGGCGGCGGCCCCGGCATGGGCCCCAT 999 Query 155099 AGGTGT 155104 || || Sbjct 998 CGGAGT 993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578878992423200