Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq1590 89.7 6e-13
>seq1590
Length=6779
Score = 89.7 bits (98), Expect = 6e-13
Identities = 169/246 (69%), Gaps = 2/246 (1%)
Strand=Plus/Minus
Query 154860 GAACTGTCATGTATTATGATTACATACCCATCTACACATGGT-GTATTTGAAACTAACAT 154918
||| | || ||| | |||||||| |||||||| || ||||| || || ||| | | |
Sbjct 1237 GAATTATCGTGTTTGATGATTACGTACCCATCCAC-CATGGGCGTGTTCGAAGAGACCGT 1179
Query 154919 TAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAA 154978
| | || || | | || |||| ||||||||||||| ||| | || || || ||
Sbjct 1178 TGCGGACATCTGCGCGTTGGTCCATGCTCATGGTGGTCAGGTCTATTTAGACGGTGCTAA 1119
Query 154979 TCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCT 155038
| | ||||| || || || || |||| |||| || || ||||| | |||||
Sbjct 1118 TATGAATGCTCAAGTGGGTCTGTGCCGACCAGGTGACTACGGCAGCGATGTGTCACATCT 1059
Query 155039 AAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098
|| ||||||| || ||||| ||||||||||| || || || || ||| | || || ||
Sbjct 1058 GAATCTACATAAGACCTTCTGCATTCCACATGGCGGCGGCGGCCCCGGCATGGGCCCCAT 999
Query 155099 AGGTGT 155104
|| ||
Sbjct 998 CGGAGT 993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578878992423200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |