Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1590 102 1e-16 >seq1590 Length=6779 Score = 102 bits (112), Expect = 1e-16 Identities = 174/248 (70%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 159535 GAACTGTCATGTATTATGATTACATATCCATCTACACATGGT-GTATTTGAAACAAACAT 159593 ||| | || ||| | |||||||| || ||||| || ||||| || || ||| | | | Sbjct 1237 GAATTATCGTGTTTGATGATTACGTACCCATCCAC-CATGGGCGTGTTCGAAGAGACCGT 1179 Query 159594 --CAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCA 159651 | |||| | || | | || |||| ||||||||||||| ||| | || ||||| Sbjct 1178 TGCGGACA--TCTGCGCGTTGGTCCATGCTCATGGTGGTCAGGTCTATTTAGACGGTGCT 1121 Query 159652 AATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCAT 159711 ||| | ||||| || || ||||| |||| ||||||| || ||||| | ||| Sbjct 1120 AATATGAATGCTCAAGTGGGTCTGTGCCGACCAGGTGACTACGGCAGCGATGTGTCACAT 1061 Query 159712 CTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCT 159771 || || |||||||||| ||||| ||||||||||| || || || || ||| | || || Sbjct 1060 CTGAATCTACATAAGACCTTCTGCATTCCACATGGCGGCGGCGGCCCCGGCATGGGCCCC 1001 Query 159772 ATTGGTGT 159779 || || || Sbjct 1000 ATCGGAGT 993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587712298742800