Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 161 2e-34 seq4710 136 9e-27 seq4983 125 2e-23 >SEQ10860 Length=7223 Score = 161 bits (178), Expect = 2e-34 Identities = 154/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||||||||| ||||||||||||| |||||| | ||||||||| | ||||| || Sbjct 1484 GTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTCCAATTGCTTGCCG 1543 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || ||||| | || ||||| ||||||||||| ||||||||||| ||||| || ||| Sbjct 1544 GCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTG 1603 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || |||||||| ||||| ||| || ||||| || | ||||| || || | ||| Sbjct 1604 ACATTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTT 1663 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | |||||| Sbjct 1664 TTAACGAAGATTTGCAT 1680 >seq4710 Length=78879 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194940 AAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTT 194999 ||| || ||||| || || || ||||| || | ||||| | ||||| || |||||||| Sbjct 8630 AAGGGTCGACTCCTTCTGGATGTTGTAGTCTGACAGAGTGCGACCATCCTCCAGCTGCTT 8689 Query 195000 ACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTG 195059 || |||||||| || || || || ||||| || || ||||| |||||||| || || Sbjct 8690 GCCAGCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTTGTCTTGGATCTTAGC 8749 Query 195060 CTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119 ||| || ||||||||||| || || ||||| || ||||| | |||||||| |||| Sbjct 8750 CTTCACATTCTCAATGGTATCAGATGGCTCCACCTCCAGGGTGATGGTCTTTCCAGTCAG 8809 Query 195120 AGTTTTTACGAACACTTGCATTT 195142 || || ||||| | |||||||| Sbjct 8810 GGTCTTCACGAAGATTTGCATTT 8832 >seq4983 Length=3163 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| || || || ||||| |||| || || | |||||||| | ||| Sbjct 667 GTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCTTCCAACTG 726 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | || || || ||||| ||||| || || ||||| || || || Sbjct 727 CTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTT 786 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| ||||| || || || || || | ||||| ||||| || || Sbjct 787 GGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAACCTCCAAGGTAATGGTCTTGCCAGT 846 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| || ||||| || | ||||| Sbjct 847 CAATGTCTTTACAAAGATCTGCAT 870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108826206682535