Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
SEQ10860 161 2e-34
seq4710 136 9e-27
seq4983 125 2e-23
>SEQ10860
Length=7223
Score = 161 bits (178), Expect = 2e-34
Identities = 154/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| ||||||||||| ||||||||||||| |||||| | ||||||||| | ||||| ||
Sbjct 1484 GTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTCCAATTGCTTGCCG 1543
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| ||||| | || ||||| ||||||||||| ||||||||||| ||||| || |||
Sbjct 1544 GCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTG 1603
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || |||||||| ||||| ||| || ||||| || | ||||| || || | |||
Sbjct 1604 ACATTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTT 1663
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | ||||||
Sbjct 1664 TTAACGAAGATTTGCAT 1680
>seq4710
Length=78879
Score = 136 bits (150), Expect = 9e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194940 AAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTT 194999
||| || ||||| || || || ||||| || | ||||| | ||||| || ||||||||
Sbjct 8630 AAGGGTCGACTCCTTCTGGATGTTGTAGTCTGACAGAGTGCGACCATCCTCCAGCTGCTT 8689
Query 195000 ACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTG 195059
|| |||||||| || || || || ||||| || || ||||| |||||||| || ||
Sbjct 8690 GCCAGCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTTGTCTTGGATCTTAGC 8749
Query 195060 CTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119
||| || ||||||||||| || || ||||| || ||||| | |||||||| ||||
Sbjct 8750 CTTCACATTCTCAATGGTATCAGATGGCTCCACCTCCAGGGTGATGGTCTTTCCAGTCAG 8809
Query 195120 AGTTTTTACGAACACTTGCATTT 195142
|| || ||||| | ||||||||
Sbjct 8810 GGTCTTCACGAAGATTTGCATTT 8832
>seq4983
Length=3163
Score = 125 bits (138), Expect = 2e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || ||||| || || || ||||| |||| || || | |||||||| | |||
Sbjct 667 GTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCTTCCAACTG 726
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| | || || || ||||| ||||| || || ||||| || || ||
Sbjct 727 CTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTT 786
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||||||||| ||||| || || || || || | ||||| ||||| || ||
Sbjct 787 GGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAACCTCCAAGGTAATGGTCTTGCCAGT 846
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| || ||||| || | |||||
Sbjct 847 CAATGTCTTTACAAAGATCTGCAT 870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108826206682535
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |