Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_015720.1 Length=45530 Score E Sequences producing significant alignments: (Bits) Value SEQ29447 125 2e-24 SEQ26880 87.8 5e-13 >SEQ29447 Length=7397 Score = 125 bits (138), Expect = 2e-24 Identities = 191/270 (71%), Gaps = 4/270 (1%) Strand=Plus/Minus Query 13555 ATCAAGATGTACGCCAACTCGGCAGTGCCGGAGTCGCTGAAGTTCCCGCACGACGCGGTG 13614 || ||||||||||||| | || || |||||||||||||| | ||||||||||||| | Sbjct 5611 ATGAAGATGTACGCCAGCAATGCGGTTCCGGAGTCGCTGAACTACCCGCACGACGCGATC 5552 Query 13615 GGCTCAGATCACGACTCGGTTGGTCTTTATCAGCAGCGTCAGGCAGGTTGGGGAACTCTC 13674 || || || || || | ||||| | |||||||||||||| || ||||| || || Sbjct 5551 GGGAGCGACCATGATTCCATCGGTCTGTTCCAGCAGCGTCAGGCCGGGTGGGGCACCGTC 5492 Query 13675 GCGCAGCGTATGTCTGCGTTCG--AGTCCACCAAGCTATTCCTGAATGCGATGAAGACCA 13732 || ||||||||| | || || ||| | | | | || | |||||| | | Sbjct 5491 GCACAGCGTATGGATCCGCACGACAGTGCGTC--GATGTTTTTCGCCGCGATGCTGCGGA 5434 Query 13733 AGTTCCCGAACTGGGCGTCCATGCCGAAGGGCGAGGTCGCTCAGGGAGTTCAGGTCTCCG 13792 |||||||||||||| ||| ||| |||| || || ||||| || |||||||| | Sbjct 5433 AGTTCCCGAACTGGCAGTCGATGGACCCCGGCGCCGTGGCGCAGGGTGTGCAGGTCTCGG 5374 Query 13793 CCTTCCCGGATCGCTATGCGACCAAGATGG 13822 | || ||||| || || |||||||||| Sbjct 5373 CATTTCCGGACCGGTACAACACCAAGATGG 5344 >SEQ26880 Length=5820 Score = 87.8 bits (96), Expect = 5e-13 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 13540 CTCGTTGAGACGGGTATCAAGATGTACGCCAACTCGGCAGTGCCGGAGTCGCTGAAGTTC 13599 || || ||| | || || ||||||||||||||| |||| ||||| ||||| |||| ||| Sbjct 1532 CTGGTGGAGTCAGGCATGAAGATGTACGCCAACCCGGCGGTGCCTGAGTCCATGAACTTC 1473 Query 13600 CCGCACGACGCGGTGGGCTCAGATCACGACTCGGTTGGTCTTTATCAGCAGCG 13652 || ||||| ||||| ||| || |||||||| || |||| |||||||| Sbjct 1472 CCCCACGATGCGGTCGGCGGCGACGCGGACTCGGTCGGCCTTTTCCAGCAGCG 1420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145494698470920