Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_016160.1 Length=36661 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 165 2e-36 >SEQ43492 Length=1174 Score = 165 bits (182), Expect = 2e-36 Identities = 275/393 (70%), Gaps = 16/393 (4%) Strand=Plus/Minus Query 13095 GGATGGGGATTTACGCACCATCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGTT 13154 ||| || || || | || ||| ||||||||| ||| |||| | | | | || | | | Sbjct 909 GGAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGT 850 Query 13155 TGTGCTTGGACACTTCGACTGCTGGGGGCTGGTAATGAGCTATTTCCGGCAAACGCATGG 13214 ||||| || || |||||||||||||||| | ||||||||||||||||| ||| || Sbjct 849 CGTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGG 790 Query 13215 TATCGAGCTCCACGATTACCGGGTGGATTATCCCTGGTGGGAAAACGCCTATCCGGACAA 13274 || | |||||| |||||||| || |||||||| |||||||| | | || || Sbjct 789 CATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAA 736 Query 13275 TTTTTATCAGGATTGCTGGTATGAATGCGGATTCAGGGAGTTTGACGGCCCGCCTCAGGA 13334 | | || ||| |||| | || ||||| || ||||||| |||||||| || | Sbjct 735 TCTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCC 676 Query 13335 AGGGGACCTCGTCATCATGCAGGT----GCAGGCCGATAAGTGGAATCATGCCGGGATTT 13390 || ||| | || || |||| ||| ||| ||| | | ||| |||||||| ||| Sbjct 675 GGGTGACATGGTGATTATGCTGGTTTCCGCA--CCGGT--GGCGAACCATGCCGGTATTC 620 Query 13391 TACTGGAGGGTAACATGCTGCTGCACCACCTGTACGGACAT-CTGAGCCAGCGCGTGCCG 13449 | || || | | ||| |||||| |||| ||||||| ||| ||||||||||| ||||| Sbjct 619 TGCTTGAAGATGGTATGTTGCTGCCCCACATGTACGG-CATGCTGAGCCAGCGGGTGCCT 561 Query 13450 TATGGGGGCTACTGGCAGGAAAGGACGATGAAG 13482 || || || || ||| | || | || ||||| Sbjct 560 TACGGTGGTTATTGGAAAGAGCGAACTGTGAAG 528 Score = 111 bits (122), Expect = 4e-20 Identities = 165/233 (71%), Gaps = 7/233 (3%) Strand=Plus/Minus Query 12762 GGTGGCTTCCCTGGTACGTCGCTGAT----CAGGAGTTGAT---ATGCGTCAGAAAACCA 12814 || ||||||||||| | ||||||| ||| || ||| ||| ||||||||| Sbjct 1172 GGCGGCTTCCCTGGCGCAGCGCTGATAAAGCAGTAGGTGACGTCATGAAAGAGAAAACCA 1113 Query 12815 TCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGTGTTGCGGCGTGGTGG 12874 | | || ||||||||||| || | ||||| ||||| | |||||||||||| | |||| Sbjct 1112 TAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCGGCATCGTGG 1053 Query 12875 CGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCGCTACCGAGCCGACAG 12934 |||| || ||| || ||| || ||||| || |||| || || | | || || | Sbjct 1052 CGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGCGGACAATCCCACCG 993 Query 12935 AACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTACG 12987 | || ||||||||||| ||||| || |||| | |||| || ||||| ||| Sbjct 992 AGCAGTTTCACCTGTCACCAGAGGATTATGTGCCCGCTGCCGAGTGGGGGACG 940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117129436870230