Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_016650.1 Length=48072 Score E Sequences producing significant alignments: (Bits) Value seq963 181 3e-41 >seq963 Length=26998 Score = 181 bits (200), Expect = 3e-41 Identities = 236/324 (73%), Gaps = 2/324 (1%) Strand=Plus/Plus Query 46808 CACCACTCCGGTCTGGACCTCGGTGCACCGGACGGTACGCCGTTCTACGCCTGCCAGGCG 46867 || |||||||| ||| ||| || | ||||| || || |||||||||||| | | Sbjct 21936 CATCACTCCGGCACCGACTTCGCCGCCGCCGACGGCACCCCCTTCTACGCCTGCGCCGGG 21995 Query 46868 GGCACGGTCCAGTACATCGGTGCCGCAAGCGGATACGGCCAGTGGCTGGTCATCGACTCC 46927 ||||| |||| |||||||| |||| ||||| ||||| |||||| | ||| ||||| | Sbjct 21996 GGCACAGTCCTCTACATCGGCCCCGCCAGCGGCTACGGTCAGTGGATTGTCCTCGACCAC 22055 Query 46928 AGCGACGCCGAGGGCGGCGGCTGTG-TCGAGTACGGACACATGTGGAATGCCTTCGCAAC 46986 ||| |||||||||||| ||| ||||||||| || |||||| | |||| ||| || Sbjct 22056 CCGGACAGTGAGGGCGGCGGC-GTGACCGAGTACGGCCATATGTGGGACGCCTACGCGAC 22114 Query 46987 CGGCCTCAAGGTCGGTGACCGGGTAAGTGCCGGCCAACTGATCGGCTACGTCGGCAGCAA 47046 ||||| || || | |||| ||| || || || |||||||||||||| || Sbjct 22115 TGGCCTGCAGCAGGGGCAGTGGGTTGATGCAGGACAGCTCATCGGCTACGTCGGGTCGAA 22174 Query 47047 CGGCCAGTCCACCGGACCCCACCTGCACATCACCGTCTGGGAGCGCGGATACGGCGGACG 47106 || ||| | ||||| || ||||| ||| |||| || |||||||| | |||||||| | Sbjct 22175 TGGTCAGGCGACCGGCCCGCACCTTCACCTCACAGTGTGGGAGCGAGCCTACGGCGGCCA 22234 Query 47107 CCGGATCGACCCCGAGGTCTGGCT 47130 || |||||||| ||| ||||| Sbjct 22235 GCGCATCGACCCGGAGACGTGGCT 22258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153624644912340