Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_016655.1
Length=51342
Score E
Sequences producing significant alignments: (Bits) Value
SEQ36764 158 4e-34
SEQ26708 136 1e-27
SEQ29893 95.1 4e-15
>SEQ36764
Length=622
Score = 158 bits (174), Expect = 4e-34
Identities = 143/180 (79%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879
|||| | |||| |||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 428 ACGGGACGCTGTCCTGCCAGCTCTACCAGCGCAGCGCGGACATGTTCCTCGGCGTGCCGT 369
Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGG 24939
|||| ||||| ||||||||||| |||||| | ||||| | ||| || ||| |||
Sbjct 368 TCAACATCGCCTCCTACGCGCTGCGGACCCACATGTTCGCCCAGCAGGCGGGCCTGGAGG 309
Query 24940 TCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGG 24999
||||||| | | | ||||||||||||||| |||| | || | |||| |||| ||||
Sbjct 308 TCGGCGAGTGCGTGTGGACCGGCGGCGACTGCCACATCTACGACATCCACCTCGACCAGG 249
>SEQ26708
Length=5696
Score = 136 bits (150), Expect = 1e-27
Identities = 192/266 (72%), Gaps = 8/266 (3%)
Strand=Plus/Plus
Query 41662 AACGACTACCACGGCCAGGGCAAGGCGGTGGACTTCTCGAACGGCGGCGACGCCGGTACA 41721
|||||| |||||| ||||| ||||| || ||| ||| |||||| ||||| | ||
Sbjct 437 AACGACCTCCACGGGCAGGGGAAGGCCGTCGACGCCTCCAACGGCTACGACGAC---ACC 493
Query 41722 CCGGAAATGATGGCCTTCGCGAACTGGATCGCGGACACCTGGG-GTGCTAACACGCTCGA 41780
|| || ||| | || | ||| | ||| || ||| || || | | | ||| |||
Sbjct 494 CCCGAGATGCAGTCCATGGCGCAGTGGTTCTACGACCGCTACCAGTACCAGCTCGC-CGA 552
Query 41781 GCTGATCCACAGCCCGTTCGGACGGAACATCAAGGACGGCAACAGCGTCGGCGACGGCAT 41840
|||||||||| ||||||||| ||| | ||| |||| ||| |||||||||||||||
Sbjct 553 GCTGATCCACTCCCCGTTCGGCAACAACGTGAAGAACGGGGACAACGTCGGCGACGGCAT 612
Query 41841 GGGGTTCTACGGGGCAGGCACGATGGCCCAGCACAGGAACCATGTCCACTGGGCAGTCGA 41900
||| ||||||||||| | ||| ||| |||||||| | ||||| |||||| || | | |
Sbjct 613 GGGCTTCTACGGGGCGGACACCATGTCCCAGCACCGCAACCACGTCCACATCGCCGCCCA 672
Query 41901 CCGCCCCCTCAA---CGAGGACGAGG 41923
|||||| | |||||||||||
Sbjct 673 GGCTCCCCTCGACGGCGAGGACGAGG 698
>SEQ29893
Length=4967
Score = 95.1 bits (104), Expect = 4e-15
Identities = 75/90 (83%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 26273 TCGCCCACTGCGAGTCGTCCGGAAACTGGAGCATCAACACCGGCAACGGGTTCTACGGCG 26332
||||||| |||||||| |||| |||||| |||||||||||||||||| ||| | ||||
Sbjct 2006 TCGCCCAGTGCGAGTCCACCGGCAACTGGGCCATCAACACCGGCAACGGTTTCAAGGGCG 1947
Query 26333 GCCTGCAGTTCACGCAGTCCACCTGGGACG 26362
|||| |||||||| | || ||||||| ||
Sbjct 1946 GCCTCCAGTTCACCGACTCGACCTGGGCCG 1917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164082915905040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |